Statistics and Breed-wide Allele Frequency - Giant Schnauzer

Updated May 3, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Giant Schnauzer (n=336)
1006	387 375 293 180	0.046
1008	386 373 289 182	0.036
1011	376 365 281 180	0.010
1014	375 373 287 178	0.237
1016	382 371 277 178	0.045
1017	386 373 289 178	0.083
1054	382 379 277 184	0.003
1065	380 371 277 181	0.003
1067	376 373 277 178	0.001
1068	380 373 287 181	0.055
1091	381 371 277 181	0.034
1092	376 379 277 181	0.275
1129	382 371 277 181	0.001
1159	395 379 277 181	0.165
1181	381 371 277 182	0.003
1263	394 369 277 180	0.001

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Giant Schnauzer (n=336)
2001	343 324 284	0.006
2003	343 324 282	0.030
2005	339 322 280	0.007
2006	339 325 280	0.150
2007	351 327 280	0.046
2012	345 322 280	0.010
2014	339 322 284	0.004
2017	343 322 280	0.001
2022	339 327 282	0.003
2031	339 322 282	0.040
2033	339 323 282	0.037
2037	341 327 280	0.368
2050	341 327 284	0.143
2053	343 324 280	0.064
2060	343 323 284	0.003
2076	345 322 282	0.001
2083	339 324 282	0.001
2090	339 322 278	0.083

Allele Frequencies

#	Locus Name	Allele	Giant Schnauzer (n=336)
1	AHT121	80	0.118
		92	0.138
		94	0.140
		96	0.001
		98	0.003
		100	0.001
		102	0.314
		104	0.104
		106	0.024
		108	0.088
		110	0.006
		112	0.055
		114	0.007
2	AHT137	131	0.061
		133	0.009
		137	0.003
		141	0.254
		143	0.001
		147	0.662
		149	0.004
		151	0.004
3	AHTH130	117	0.318
		119	0.071
		121	0.155
		125	0.027
		127	0.015
		129	0.146
		131	0.260
		133	0.006
		135	0.001
4	AHTh171-A	219	0.397
		221	0.040
		225	0.241
		227	0.003
		229	0.001
		233	0.272
		235	0.045
5	AHTh260	238	0.183
		240	0.234
		242	0.012
		246	0.487
		248	0.068
		250	0.010
		252	0.006
6	AHTk211	87	0.571
		91	0.253
		93	0.065
		95	0.110
7	AHTk253	284	0.010
		286	0.403
		288	0.161
		290	0.116
		292	0.202
		294	0.107
8	C22.279	116	0.098
		118	0.555
		122	0.025
		124	0.265
		126	0.057
9	FH2001	128	0.189
		132	0.057
		136	0.006
		144	0.376
		148	0.359
		152	0.012
		158	0.001
10	FH2054	144	0.018
		152	0.201
		156	0.304
		160	0.311
		164	0.001
		168	0.118
		172	0.048
11	FH2848	230	0.003
		232	0.031
		234	0.208
		236	0.024
		238	0.109
		240	0.551
		242	0.012
		244	0.063
12	INRA21	95	0.487
		97	0.016
		99	0.013
		101	0.162
		103	0.146
		105	0.176
13	INU005	110	0.004
		122	0.003
		124	0.789
		126	0.113
		128	0.010
		130	0.004
		132	0.076
14	INU030	144	0.231
		146	0.278
		148	0.006
		150	0.202
		152	0.253
		154	0.030
15	INU055	208	0.003
		210	0.469
		214	0.074
		216	0.262
		218	0.168
		220	0.024
16	LEI004	83	0.001
		85	0.094
		95	0.829
		103	0.001
		107	0.074
17	REN105L03	231	0.025
		233	0.918
		235	0.034
		239	0.001
		241	0.021
18	REN162C04	200	0.030
		202	0.281
		204	0.202
		206	0.290
		208	0.196
19	REN169D01	202	0.009
		210	0.004
		212	0.003
		216	0.878
		220	0.052
		222	0.054
20	REN169O18	160	0.146
		162	0.266
		164	0.007
		166	0.141
		168	0.268
		170	0.168
		172	0.003
21	REN247M23	268	0.574
		270	0.189
		272	0.204
		276	0.033
22	REN54P11	222	0.010
		226	0.217
		228	0.040
		232	0.021
		234	0.010
		236	0.443
		238	0.257
23	REN64E19	145	0.405
		147	0.246
		153	0.348
		155	0.001
24	VGL0760	12	0.737
		13	0.013
		14	0.003
		18.2	0.061
		19.2	0.037
		20.2	0.024
		21.2	0.052
		22.2	0.049
		23.2	0.024
25	VGL0910	16	0.052
		16.1	0.010
		17	0.003
		17.1	0.235
		18.1	0.116
		19.1	0.283
		20.1	0.170
		21.1	0.031
		22.1	0.091
		23.1	0.007
		24.1	0.001
26	VGL1063	8	0.001
		9	0.003
		11	0.012
		13	0.223
		14	0.305
		15	0.049
		16	0.034
		17	0.003
		18	0.146
		19	0.031
		20	0.186
		21	0.001
		22	0.004
27	VGL1165	15	0.103
		16	0.152
		17	0.244
		18	0.003
		19	0.122
		21	0.003
		22	0.079
		26	0.055
		27	0.001
		28	0.004
		29	0.186
		30	0.046
		33	0.001
28	VGL1828	14	0.104
		15	0.001
		16	0.129
		17	0.321
		18	0.015
		19	0.098
		20	0.115
		21	0.189
		22	0.003
		23	0.024
29	VGL2009	9	0.006
		11	0.037
		12	0.036
		13	0.597
		14	0.088
		15	0.235
		16	0.001
30	VGL2409	13	0.022
		14	0.022
		15	0.176
		16	0.040
		17	0.116
		18	0.385
		19	0.070
		20	0.162
		21	0.006
31	VGL2918	11	0.003
		12	0.259
		13	0.168
		14	0.076
		15	0.012
		16	0.004
		17.3	0.161
		18.3	0.174
		19.3	0.106
		20.3	0.022
		21.3	0.010
		22.3	0.004
32	VGL3008	10	0.188
		13	0.004
		15	0.118
		16	0.067
		17	0.009
		18	0.170
		19	0.268
		20	0.165
		21	0.012
33	VGL3235	13	0.290
		14	0.449
		15	0.132
		16	0.086
		18	0.042

Standard genetic assessment based on 33 autosomal STR loci

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	336	7.485	3.520	0.623	0.653	0.054
	SE		0.450	0.247	0.031	0.031	0.010

Standard genetic assessment based on 7 STRs in the DLA region

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	336	5.571	2.912	0.620	0.630	0.014
	SE		0.566	0.372	0.028	0.030	0.007

Standard genetic assessment for individual STR loci

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	336	13	5.767	0.762	0.827	0.078
2	AHT137	336	8	1.972	0.494	0.493	-0.002
3	AHTH130	336	9	4.535	0.762	0.779	0.023
4	AHTh171-A	336	7	3.404	0.711	0.706	-0.007
5	AHTh260	336	7	3.032	0.705	0.670	-0.053
6	AHTk211	336	4	2.457	0.521	0.593	0.122
7	AHTk253	336	6	3.930	0.702	0.746	0.058
8	C22.279	336	5	2.553	0.557	0.608	0.085
9	FH2001	336	7	3.232	0.601	0.691	0.129
10	FH2054	336	7	4.071	0.762	0.754	-0.010
11	FH2848	336	8	2.748	0.610	0.636	0.041
12	INRA21	336	6	3.168	0.634	0.684	0.074
13	INU005	336	7	1.561	0.327	0.359	0.089
14	INU030	336	6	4.228	0.735	0.763	0.037
15	INU055	336	6	3.099	0.625	0.677	0.077
16	LEI004	336	5	1.426	0.301	0.299	-0.007
17	REN105L03	336	5	1.183	0.137	0.155	0.115
18	REN162C04	336	5	4.103	0.717	0.756	0.052
19	REN169D01	336	6	1.288	0.161	0.223	0.281
20	REN169O18	336	7	4.710	0.756	0.788	0.040
21	REN247M23	336	4	2.449	0.580	0.592	0.019
22	REN54P11	336	7	3.201	0.622	0.688	0.095
23	REN64E19	336	4	2.895	0.637	0.655	0.027
24	VGL0760	336	9	1.805	0.378	0.446	0.152
25	VGL0910	336	11	5.275	0.789	0.810	0.027
26	VGL1063	336	13	4.914	0.741	0.797	0.070
27	VGL1165	336	13	6.491	0.830	0.846	0.018
28	VGL1828	336	10	5.257	0.783	0.810	0.033
29	VGL2009	336	7	2.371	0.548	0.578	0.053
30	VGL2409	336	9	4.411	0.771	0.773	0.003
31	VGL2918	336	12	5.911	0.836	0.831	-0.007
32	VGL3008	336	9	5.509	0.795	0.818	0.029
33	VGL3235	336	5	3.196	0.655	0.687	0.047

Standard genetic assessment for 7 STRs in the DLA region

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	336	9	5.285	0.789	0.811	0.027
2	DLA I-4ACA	336	6	2.658	0.613	0.624	0.017
3	DLA I-4BCT	336	5	2.595	0.598	0.615	0.027
4	DLA1131	336	5	2.357	0.586	0.576	-0.018
5	5ACA	336	5	2.626	0.616	0.619	0.005
6	5ACT	336	5	2.705	0.604	0.630	0.042
7	5BCA	336	4	2.159	0.536	0.537	0.002

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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