Statistics and Breed-wide Allele Frequency - Great Dane

Updated May 15, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=76)
1006	387 375 293 180	0.013
1009	382 377 277 184	0.099
1016	382 371 277 178	0.211
1030	380 373 293 178	0.257
1066	376 375 277 178	0.164
1068	380 373 287 181	0.007
1091	381 371 277 181	0.059
1094	395 375 277 176	0.033
1129	382 371 277 181	0.086
1273	376 375 277 176	0.007
1274	385 371 277 181	0.007
1275	387 371 277 181	0.020
1276	392 373 281 182	0.020
1277	394 369 277 183	0.007
1278	399 373 277 181	0.013

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=76)
2003	343 324 282	0.007
2005	339 322 280	0.053
2007	351 327 280	0.013
2014	339 322 284	0.033
2022	339 327 282	0.099
2023	341 323 282	0.257
2033	339 323 282	0.178
2046	339 329 280	0.329
2053	343 324 280	0.007
2086	339 329 284	0.007
2136	353 324 280	0.020

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=77)
1	AHT121	80	0.020
		94	0.086
		98	0.309
		100	0.007
		102	0.026
		104	0.007
		106	0.118
		108	0.013
		110	0.053
		112	0.020
		114	0.237
		118	0.105
2	AHT137	129	0.006
		131	0.143
		133	0.032
		137	0.078
		141	0.188
		147	0.545
		151	0.006
3	AHTH130	117	0.020
		119	0.132
		121	0.191
		123	0.033
		125	0.007
		127	0.441
		131	0.046
		133	0.132
4	AHTh171-A	219	0.316
		221	0.013
		225	0.033
		227	0.164
		229	0.204
		233	0.164
		235	0.105
5	AHTh260	238	0.013
		242	0.006
		244	0.299
		246	0.552
		248	0.078
		250	0.045
		254	0.006
6	AHTk211	87	0.020
		89	0.316
		91	0.401
		95	0.263
7	AHTk253	286	0.217
		288	0.526
		290	0.230
		292	0.026
8	C22.279	116	0.046
		118	0.599
		120	0.099
		122	0.039
		124	0.217
9	FH2001	128	0.007
		132	0.151
		136	0.046
		144	0.566
		148	0.164
		152	0.053
		158	0.013
10	FH2054	148	0.020
		152	0.007
		156	0.461
		160	0.217
		164	0.171
		168	0.072
		172	0.020
		176	0.033
11	FH2848	232	0.053
		234	0.664
		238	0.211
		240	0.053
		242	0.020
12	INRA21	91	0.045
		95	0.390
		99	0.325
		101	0.221
		105	0.019
13	INU005	110	0.020
		122	0.072
		124	0.336
		126	0.559
		132	0.013
14	INU030	144	0.039
		146	0.006
		150	0.675
		152	0.279
15	INU055	204	0.026
		208	0.091
		210	0.162
		212	0.273
		216	0.344
		218	0.104
16	LEI004	85	0.132
		95	0.776
		97	0.039
		107	0.007
		111	0.046
17	REN105L03	227	0.066
		231	0.217
		233	0.079
		235	0.474
		241	0.066
		245	0.099
18	REN162C04	192	0.079
		194	0.007
		202	0.283
		204	0.092
		206	0.118
		208	0.421
19	REN169D01	202	0.033
		212	0.224
		216	0.434
		220	0.309
20	REN169O18	164	0.039
		166	0.125
		168	0.414
		170	0.414
		172	0.007
21	REN247M23	268	0.197
		272	0.796
		278	0.007
22	REN54P11	222	0.007
		226	0.171
		228	0.125
		232	0.046
		234	0.230
		238	0.421
23	REN64E19	139	0.156
		143	0.123
		145	0.136
		147	0.136
		149	0.357
		153	0.091
24	VGL0760	12	0.145
		13	0.020
		19.2	0.066
		20.2	0.039
		21.2	0.020
		22.2	0.158
		23.2	0.250
		24.2	0.276
		25.2	0.026
25	VGL0910	12	0.020
		14	0.033
		17.1	0.013
		18.1	0.013
		19	0.007
		19.1	0.066
		20.1	0.349
		21.1	0.342
		22.1	0.099
		23.1	0.039
		24.1	0.020
26	VGL1063	12	0.007
		13	0.066
		14	0.414
		15	0.382
		16	0.053
		17	0.053
		18	0.013
		19	0.013
27	VGL1165	15	0.007
		18	0.046
		19	0.039
		21	0.020
		22	0.007
		25	0.007
		26	0.178
		27	0.526
		28	0.033
		29	0.125
		30	0.007
		31	0.007
28	VGL1828	14	0.026
		15	0.072
		16	0.322
		17	0.053
		19	0.171
		20	0.151
		21	0.033
		22	0.171
29	VGL2009	9	0.276
		13	0.013
		14	0.033
		15	0.638
		16	0.039
30	VGL2409	13	0.197
		14	0.007
		15	0.099
		16	0.059
		17	0.349
		18	0.250
		19	0.039
31	VGL2918	11	0.013
		12	0.020
		13	0.638
		14	0.112
		15	0.033
		16	0.046
		18.3	0.059
		19.3	0.039
		21.3	0.039
32	VGL3008	13	0.039
		14	0.033
		15	0.020
		16	0.118
		17	0.322
		18	0.289
		19	0.086
		20	0.039
		21	0.053
33	VGL3235	12	0.296
		13	0.046
		14	0.579
		16	0.007
		17	0.020
		18	0.053

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	77	6.636	3.234	0.620	0.655	0.057
	SE		0.388	0.183	0.024	0.021	0.016

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	77	5.571	2.603	0.566	0.583	0.023
	SE		0.805	0.286	0.037	0.044	0.022

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	77	12	5.302	0.868	0.811	-0.070
2	AHT137	77	7	2.773	0.545	0.639	0.147
3	AHTH130	77	8	3.718	0.553	0.731	0.244
4	AHTh171-A	77	7	4.813	0.697	0.792	0.120
5	AHTh260	77	7	2.486	0.558	0.598	0.066
6	AHTk211	77	4	3.026	0.684	0.670	-0.022
7	AHTk253	77	4	2.647	0.618	0.622	0.006
8	C22.279	77	5	2.387	0.553	0.581	0.049
9	FH2001	77	7	2.665	0.632	0.625	-0.011
10	FH2054	77	8	3.383	0.711	0.704	-0.009
11	FH2848	77	5	2.033	0.395	0.508	0.223
12	INRA21	77	5	3.243	0.714	0.692	-0.033
13	INU005	77	5	2.320	0.474	0.569	0.167
14	INU030	77	4	1.867	0.506	0.464	-0.091
15	INU055	77	6	4.186	0.792	0.761	-0.041
16	LEI004	77	5	1.603	0.342	0.376	0.091
17	REN105L03	77	6	3.377	0.632	0.704	0.103
18	REN162C04	77	6	3.495	0.724	0.714	-0.014
19	REN169D01	77	4	2.983	0.500	0.665	0.248
20	REN169O18	77	5	2.772	0.671	0.639	-0.050
21	REN247M23	77	3	1.487	0.276	0.327	0.156
22	REN54P11	77	6	3.605	0.724	0.723	-0.001
23	REN64E19	77	6	4.706	0.714	0.787	0.093
24	VGL0760	77	9	5.206	0.776	0.808	0.039
25	VGL0910	77	11	3.899	0.671	0.744	0.097
26	VGL1063	77	8	3.052	0.500	0.672	0.256
27	VGL1165	77	12	3.034	0.684	0.670	-0.021
28	VGL1828	77	8	5.125	0.829	0.805	-0.030
29	VGL2009	77	5	2.056	0.500	0.514	0.026
30	VGL2409	77	7	4.204	0.737	0.762	0.033
31	VGL2918	77	9	2.325	0.526	0.570	0.076
32	VGL3008	77	9	4.621	0.789	0.784	-0.008
33	VGL3235	77	6	2.336	0.553	0.572	0.034

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	77	10	3.785	0.649	0.736	0.117
2	DLA I-4ACA	77	5	3.417	0.675	0.707	0.045
3	DLA I-4BCT	77	4	1.758	0.434	0.431	-0.007
4	DLA1131	77	7	2.236	0.500	0.553	0.096
5	5ACA	77	5	1.809	0.461	0.447	-0.030
6	5ACT	77	5	3.090	0.688	0.676	-0.018
7	5BCA	77	3	2.128	0.553	0.530	-0.042

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Connect with us on social media