UC Davis School of Veterinary Medicine Veterinary Genetics Laboratory
Genetic Diversity Testing for Polish Lowland Sheepdogs

DLA class I and II haplotypes identified to date in Polish Lowland Sheepdogs

DLA Class I Haplotype Frequencies (Updated Dec 15, 2018)
DLA1 #STR typesPolish Lowland Sheepdog (n=16)Polski Owczarek Nizinny (n=1)
1040380 371 277 1860.590.5
1067376 373 277 1780.380.5
1156380 373 291 1780.03--
DLA Class II Haplotype Frequencies (Updated Dec 15, 2018)
DLA2 #STR typesPolish Lowland Sheepdog (n=16)Polski Owczarek Nizinny (n=1)
2014339 322 2840.590.5
2017343 322 2800.380.5
2098343 323 2820.03--

STR Allele Frequencies

Table 1: STR alleles from 33 genomic loci and their frequencies in different populations

#Locus NameAlleleAllele Frequency (Dec 15, 2018)
Polish Lowland Sheepdog (n=16)Polski Owczarek Nizinny (n=1)
1AHT121 1000.440.5
1020.44--
1060.130.5
2AHT137 1310.220.5
1450.780.5
3AHTH130 1210.16--
1270.310.5
1310.500.5
1330.03--
4AHTh171-A 2190.09--
2330.09--
2370.751.0
2390.06--
5AHTh260 2400.09--
2440.09--
2460.591.0
2500.22--
6AHTk211 870.44--
910.561.0
7AHTk253 2840.16--
2900.631.0
2920.22--
8C22.279 1160.28--
1180.16--
1240.561.0
9FH2001 1320.970.5
1440.030.5
10FH2054 1520.030.5
1560.44--
1640.06--
1680.440.5
1760.03--
11FH2848 2320.250.5
2360.47--
2420.280.5
12INRA21 950.06--
1010.941.0
13INU005 1240.810.5
1280.130.5
1320.06--
14INU030 1440.50--
1500.381.0
1520.13--
15INU055 2040.19--
2100.530.5
2180.280.5
16LEI004 950.881.0
970.13--
17REN105L03 2270.03--
2310.560.5
2330.410.5
18REN162C04 2040.22--
2060.691.0
2100.09--
19REN169D01 2120.28--
2160.66--
2200.061.0
20REN169O18 1640.560.5
1660.03--
1700.410.5
21REN247M23 2660.131.0
2680.78--
2720.09--
22REN54P11 2280.441.0
2320.16--
2360.13--
2380.28--
23REN64E19 1470.38--
1490.03--
1530.591.0
24VGL0760 150.72--
20.20.13--
21.20.161.0
25VGL0910 140.250.5
150.16--
160.220.5
19.10.06--
20.10.06--
21.10.22--
22.10.03--
26VGL1063 140.160.5
150.13--
160.34--
170.09--
180.25--
190.030.5
27VGL1165 170.130.5
260.53--
280.09--
300.220.5
310.03--
28VGL1828 190.220.5
200.34--
210.34--
230.090.5
29VGL2009 100.09--
110.130.5
140.660.5
150.13--
30VGL2409 170.781.0
180.09--
190.13--
31VGL2918 120.721.0
150.06--
17.30.22--
32VGL3008 150.280.5
160.09--
170.06--
180.310.5
190.25--
33VGL3235 130.13--
140.661.0
160.22--

Veterinary Genetics Laboratory Tel 530-752-2211 Email VGL