UC Davis School of Veterinary Medicine Veterinary Genetics Laboratory
Genetic Diversity Testing for Polish Lowland Sheepdogs

DLA class I and II haplotypes identified to date in Polish Lowland Sheepdogs

DLA Class I Haplotype Frequencies (Updated Oct 16, 2017)
Polish Lowland Sheepdog (n=15)
1040380 371 277 1860.57
1067376 373 277 1780.40
1156380 373 291 1780.03
DLA Class II Haplotype Frequencies (Updated Oct 16, 2017)
Polish Lowland Sheepdog (n=15)
2014339 322 2840.57
2017343 322 2800.40
2098343 323 2820.03

STR Allele Frequencies

Table 1: STR alleles from 33 genomic loci and their frequencies in different populations

#Locus NameAlleleAllele Frequency (Oct 16, 2017)
Polish Lowland Sheepdog (n=15)
1AHT121 1000.43
1020.43
1060.13
2AHT137 1310.23
1450.77
3AHTH130 1210.17
1270.30
1310.50
1330.03
4AHTh171-A 2190.07
2330.10
2370.77
2390.07
5AHTh260 2400.10
2440.07
2460.60
2500.23
6AHTk211 870.40
910.60
7AHTk253 2840.13
2900.63
2920.23
8C22.279 1160.27
1180.17
1240.57
9FH2001 1320.97
1440.03
10FH2054 1520.03
1560.40
1640.07
1680.47
1760.03
11FH2848 2320.23
2360.50
2420.27
12INRA21 950.07
1010.93
13INU005 1240.83
1280.10
1320.07
14INU030 1440.50
1500.37
1520.13
15INU055 2040.17
2100.53
2180.30
16LEI004 950.87
970.13
17REN105L03 2270.03
2310.57
2330.40
18REN162C04 2040.23
2060.70
2100.07
19REN169D01 2120.27
2160.67
2200.07
20REN169O18 1640.53
1660.03
1700.43
21REN247M23 2660.13
2680.77
2720.10
22REN54P11 2280.43
2320.17
2360.13
2380.27
23REN64E19 1470.37
1490.03
1530.60
24VGL0760 150.73
20.20.13
21.20.13
25VGL0910 140.27
150.13
160.23
19.10.07
20.10.03
21.10.23
22.10.03
26VGL1063 140.13
150.13
160.33
170.10
180.27
190.03
27VGL1165 170.13
260.53
280.10
300.20
310.03
28VGL1828 190.23
200.33
210.33
230.10
29VGL2009 100.10
110.13
140.63
150.13
30VGL2409 170.77
180.10
190.13
31VGL2918 120.70
150.07
17.30.23
32VGL3008 150.27
160.10
170.07
180.30
190.27
33VGL3235 130.13
140.67
160.20

Veterinary Genetics Laboratory, Tel 530-752-2211, Email VGL