Updated Apr 22, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Toy Poodle (n=235) |
---|---|---|
1001 | 380 373 281 182 | 0.028 |
1002 | 380 365 281 181 | 0.004 |
1005 | 389 371 277 181 | 0.021 |
1006 | 387 375 293 180 | 0.002 |
1008 | 386 373 289 182 | 0.019 |
1009 | 382 377 277 184 | 0.070 |
1011 | 376 365 281 180 | 0.049 |
1012 | 388 369 289 188 | 0.021 |
1013 | 392 373 289 186 | 0.074 |
1014 | 375 373 287 178 | 0.068 |
1016 | 382 371 277 178 | 0.023 |
1018 | 375 373 287 186 | 0.281 |
1020 | 388 369 289 184 | 0.028 |
1021 | 380 373 289 186 | 0.002 |
1028 | 376 369 291 186 | 0.017 |
1031 | 382 371 277 186 | 0.004 |
1035 | 386 373 277 184 | 0.002 |
1036 | 389 365 289 180 | 0.011 |
1040 | 380 371 277 186 | 0.002 |
1045 | 376 371 277 186 | 0.019 |
1053 | 382 377 277 186 | 0.002 |
1054 | 382 379 277 184 | 0.002 |
1068 | 380 373 287 181 | 0.009 |
1105 | 382 379 277 178 | 0.077 |
1107 | 376 375 293 183 | 0.009 |
1109 | 381 379 291 186 | 0.045 |
1111 | 387 378 287 182 | 0.068 |
1115 | 386 371 277 182 | 0.002 |
1123 | 386 379 277 184 | 0.002 |
1132 | 376 379 277 184 | 0.002 |
1168 | 382 379 289 186 | 0.002 |
1182 | 382 369 289 176 | 0.009 |
1183 | 382 377 287 182 | 0.002 |
1184 | 386 371 277 178 | 0.002 |
1185 | 388 365 289 188 | 0.002 |
1186 | 389 365 289 186 | 0.004 |
1187 | 389 371 289 176 | 0.002 |
1188 | 395 377 277 184 | 0.002 |
1203 | 378 375 293 180 | 0.002 |
1204 | 378 375 293 181 | 0.002 |
1233 | 382 379 277 180 | 0.002 |
1280 | 392 369 289 188 | 0.002 |
1282 | 376 375 277 186 | 0.002 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Toy Poodle (n=235) |
---|---|---|
2001 | 343 324 284 | 0.004 |
2003 | 343 324 282 | 0.428 |
2005 | 339 322 280 | 0.002 |
2006 | 339 325 280 | 0.002 |
2007 | 351 327 280 | 0.002 |
2008 | 339 327 276 | 0.064 |
2009 | 351 324 280 | 0.028 |
2011 | 345 322 284 | 0.051 |
2012 | 345 322 280 | 0.051 |
2014 | 339 322 284 | 0.021 |
2015 | 339 327 280 | 0.045 |
2016 | 339 323 284 | 0.009 |
2017 | 343 322 280 | 0.002 |
2021 | 339 324 268 | 0.077 |
2022 | 339 327 282 | 0.006 |
2024 | 343 323 280 | 0.079 |
2025 | 351 321 280 | 0.011 |
2027 | 343 325 284 | 0.002 |
2033 | 339 323 282 | 0.004 |
2037 | 341 327 280 | 0.009 |
2040 | 345 327 280 | 0.019 |
2050 | 341 327 284 | 0.062 |
2053 | 343 324 280 | 0.011 |
2068 | 339 327 284 | 0.009 |
2094 | 339 322 276 | 0.002 |
2104 | 341 323 284 | 0.002 |
Allele Frequencies
# | Locus Name | Allele | Toy Poodle (n=235) |
---|---|---|---|
1 | AHT121 | 92 | 0.055 |
94 | 0.002 | ||
96 | 0.117 | ||
98 | 0.055 | ||
100 | 0.077 | ||
102 | 0.217 | ||
104 | 0.264 | ||
106 | 0.087 | ||
108 | 0.126 | ||
2 | AHT137 | 131 | 0.074 |
133 | 0.151 | ||
135 | 0.030 | ||
137 | 0.157 | ||
141 | 0.026 | ||
143 | 0.070 | ||
145 | 0.006 | ||
147 | 0.468 | ||
149 | 0.009 | ||
151 | 0.009 | ||
3 | AHTH130 | 117 | 0.140 |
119 | 0.138 | ||
121 | 0.383 | ||
123 | 0.043 | ||
125 | 0.030 | ||
127 | 0.062 | ||
129 | 0.030 | ||
131 | 0.153 | ||
133 | 0.006 | ||
135 | 0.013 | ||
137 | 0.002 | ||
4 | AHTh171-A | 217 | 0.017 |
219 | 0.194 | ||
221 | 0.032 | ||
223 | 0.062 | ||
225 | 0.230 | ||
227 | 0.009 | ||
229 | 0.004 | ||
231 | 0.098 | ||
233 | 0.172 | ||
235 | 0.083 | ||
237 | 0.096 | ||
239 | 0.004 | ||
5 | AHTh260 | 238 | 0.189 |
240 | 0.047 | ||
242 | 0.017 | ||
244 | 0.149 | ||
246 | 0.326 | ||
250 | 0.009 | ||
252 | 0.055 | ||
254 | 0.204 | ||
255 | 0.002 | ||
258 | 0.002 | ||
6 | AHTk211 | 87 | 0.040 |
89 | 0.628 | ||
91 | 0.240 | ||
93 | 0.015 | ||
95 | 0.070 | ||
97 | 0.006 | ||
7 | AHTk253 | 280 | 0.138 |
284 | 0.132 | ||
286 | 0.013 | ||
288 | 0.521 | ||
290 | 0.106 | ||
292 | 0.089 | ||
8 | C22.279 | 114 | 0.002 |
116 | 0.277 | ||
118 | 0.413 | ||
120 | 0.030 | ||
122 | 0.006 | ||
124 | 0.232 | ||
130 | 0.040 | ||
9 | FH2001 | 132 | 0.362 |
136 | 0.155 | ||
140 | 0.013 | ||
144 | 0.330 | ||
148 | 0.115 | ||
152 | 0.019 | ||
156 | 0.006 | ||
10 | FH2054 | 148 | 0.055 |
152 | 0.096 | ||
156 | 0.064 | ||
160 | 0.049 | ||
164 | 0.019 | ||
168 | 0.540 | ||
172 | 0.155 | ||
176 | 0.006 | ||
180 | 0.015 | ||
11 | FH2848 | 230 | 0.040 |
232 | 0.194 | ||
234 | 0.004 | ||
236 | 0.072 | ||
238 | 0.268 | ||
240 | 0.247 | ||
242 | 0.170 | ||
244 | 0.004 | ||
12 | INRA21 | 91 | 0.047 |
95 | 0.187 | ||
97 | 0.502 | ||
99 | 0.085 | ||
101 | 0.170 | ||
109 | 0.009 | ||
13 | INU005 | 106 | 0.002 |
110 | 0.168 | ||
122 | 0.055 | ||
124 | 0.200 | ||
126 | 0.389 | ||
128 | 0.060 | ||
130 | 0.011 | ||
132 | 0.002 | ||
138 | 0.113 | ||
14 | INU030 | 144 | 0.281 |
146 | 0.064 | ||
148 | 0.130 | ||
150 | 0.443 | ||
152 | 0.062 | ||
156 | 0.021 | ||
15 | INU055 | 208 | 0.013 |
210 | 0.340 | ||
212 | 0.143 | ||
214 | 0.109 | ||
216 | 0.087 | ||
218 | 0.260 | ||
222 | 0.049 | ||
16 | LEI004 | 85 | 0.253 |
95 | 0.672 | ||
97 | 0.028 | ||
105 | 0.019 | ||
107 | 0.023 | ||
109 | 0.002 | ||
111 | 0.002 | ||
17 | REN105L03 | 227 | 0.015 |
229 | 0.006 | ||
231 | 0.085 | ||
233 | 0.302 | ||
235 | 0.062 | ||
237 | 0.130 | ||
241 | 0.400 | ||
18 | REN162C04 | 200 | 0.074 |
202 | 0.332 | ||
204 | 0.409 | ||
206 | 0.106 | ||
208 | 0.074 | ||
210 | 0.004 | ||
19 | REN169D01 | 202 | 0.202 |
210 | 0.217 | ||
212 | 0.132 | ||
214 | 0.036 | ||
216 | 0.174 | ||
218 | 0.164 | ||
220 | 0.034 | ||
222 | 0.040 | ||
20 | REN169O18 | 160 | 0.100 |
162 | 0.528 | ||
164 | 0.085 | ||
166 | 0.036 | ||
168 | 0.019 | ||
170 | 0.228 | ||
172 | 0.004 | ||
21 | REN247M23 | 266 | 0.102 |
268 | 0.323 | ||
270 | 0.055 | ||
272 | 0.517 | ||
278 | 0.002 | ||
22 | REN54P11 | 226 | 0.264 |
228 | 0.034 | ||
230 | 0.083 | ||
232 | 0.174 | ||
234 | 0.257 | ||
236 | 0.006 | ||
238 | 0.181 | ||
23 | REN64E19 | 139 | 0.055 |
143 | 0.032 | ||
145 | 0.413 | ||
147 | 0.219 | ||
149 | 0.204 | ||
151 | 0.004 | ||
153 | 0.072 | ||
24 | VGL0760 | 12 | 0.138 |
13 | 0.004 | ||
14 | 0.017 | ||
15 | 0.034 | ||
16 | 0.004 | ||
18.2 | 0.011 | ||
19 | 0.006 | ||
19.2 | 0.002 | ||
20 | 0.002 | ||
20.2 | 0.004 | ||
21.2 | 0.104 | ||
22.2 | 0.072 | ||
23.2 | 0.355 | ||
24.2 | 0.153 | ||
25.2 | 0.089 | ||
26.2 | 0.002 | ||
25 | VGL0910 | 14 | 0.002 |
15 | 0.002 | ||
16.1 | 0.028 | ||
17.1 | 0.064 | ||
18.1 | 0.266 | ||
19.1 | 0.230 | ||
20.1 | 0.219 | ||
21.1 | 0.045 | ||
22 | 0.011 | ||
22.1 | 0.089 | ||
23 | 0.028 | ||
23.1 | 0.006 | ||
24 | 0.009 | ||
24.1 | 0.002 | ||
26 | VGL1063 | 8 | 0.009 |
9 | 0.017 | ||
13 | 0.100 | ||
14 | 0.240 | ||
15 | 0.072 | ||
16 | 0.034 | ||
17 | 0.255 | ||
18 | 0.115 | ||
19 | 0.136 | ||
20 | 0.015 | ||
21 | 0.006 | ||
27 | VGL1165 | 15 | 0.019 |
16 | 0.002 | ||
17 | 0.017 | ||
18 | 0.257 | ||
19 | 0.117 | ||
20 | 0.021 | ||
21 | 0.057 | ||
22 | 0.011 | ||
23 | 0.047 | ||
25 | 0.017 | ||
26 | 0.255 | ||
27 | 0.011 | ||
28 | 0.040 | ||
29 | 0.060 | ||
30 | 0.023 | ||
31 | 0.036 | ||
32 | 0.009 | ||
28 | VGL1828 | 15 | 0.009 |
16 | 0.038 | ||
17 | 0.121 | ||
19 | 0.098 | ||
20 | 0.523 | ||
21 | 0.181 | ||
22 | 0.019 | ||
23 | 0.011 | ||
29 | VGL2009 | 9 | 0.028 |
10 | 0.051 | ||
11 | 0.009 | ||
12 | 0.019 | ||
13 | 0.102 | ||
14 | 0.460 | ||
15 | 0.321 | ||
16 | 0.011 | ||
30 | VGL2409 | 13 | 0.002 |
14 | 0.028 | ||
15 | 0.011 | ||
16 | 0.064 | ||
17 | 0.466 | ||
18 | 0.326 | ||
18.1 | 0.002 | ||
19 | 0.049 | ||
20 | 0.030 | ||
21 | 0.023 | ||
31 | VGL2918 | 9 | 0.002 |
12 | 0.028 | ||
13 | 0.085 | ||
14 | 0.111 | ||
15 | 0.079 | ||
16 | 0.234 | ||
16.3 | 0.004 | ||
17 | 0.017 | ||
17.3 | 0.017 | ||
18 | 0.002 | ||
18.3 | 0.153 | ||
19 | 0.002 | ||
19.3 | 0.174 | ||
20.3 | 0.023 | ||
21.3 | 0.034 | ||
22.3 | 0.034 | ||
32 | VGL3008 | 13 | 0.043 |
14 | 0.032 | ||
15 | 0.204 | ||
16 | 0.145 | ||
17 | 0.387 | ||
18 | 0.100 | ||
19 | 0.013 | ||
20 | 0.051 | ||
21 | 0.021 | ||
22 | 0.004 | ||
33 | VGL3235 | 11 | 0.002 |
12 | 0.028 | ||
13 | 0.089 | ||
14 | 0.234 | ||
15 | 0.021 | ||
16 | 0.287 | ||
17 | 0.270 | ||
18 | 0.064 | ||
19 | 0.004 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 235 | 8.970 | 4.155 | 0.718 | 0.733 | 0.021 | |
SE | 0.529 | 0.230 | 0.015 | 0.015 | 0.007 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 235 | 7.286 | 3.582 | 0.697 | 0.709 | 0.016 | |
SE | 0.897 | 0.300 | 0.020 | 0.021 | 0.007 |
Standard genetic assessment for individual STR loci
Toy Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 235 | 9 | 6.033 | 0.826 | 0.834 | 0.010 |
2 | AHT137 | 235 | 10 | 3.585 | 0.723 | 0.721 | -0.003 |
3 | AHTH130 | 235 | 11 | 4.617 | 0.770 | 0.783 | 0.017 |
4 | AHTh171-A | 235 | 12 | 6.629 | 0.834 | 0.849 | 0.018 |
5 | AHTh260 | 235 | 10 | 4.731 | 0.787 | 0.789 | 0.002 |
6 | AHTk211 | 235 | 6 | 2.181 | 0.494 | 0.541 | 0.088 |
7 | AHTk253 | 235 | 6 | 3.051 | 0.651 | 0.672 | 0.032 |
8 | C22.279 | 235 | 7 | 3.298 | 0.689 | 0.697 | 0.011 |
9 | FH2001 | 235 | 7 | 3.604 | 0.757 | 0.723 | -0.048 |
10 | FH2054 | 235 | 9 | 2.981 | 0.587 | 0.664 | 0.116 |
11 | FH2848 | 235 | 8 | 4.851 | 0.766 | 0.794 | 0.035 |
12 | INRA21 | 235 | 6 | 3.071 | 0.694 | 0.674 | -0.029 |
13 | INU005 | 235 | 9 | 4.179 | 0.715 | 0.761 | 0.060 |
14 | INU030 | 235 | 6 | 3.334 | 0.655 | 0.700 | 0.064 |
15 | INU055 | 235 | 7 | 4.434 | 0.779 | 0.774 | -0.005 |
16 | LEI004 | 235 | 7 | 1.931 | 0.523 | 0.482 | -0.086 |
17 | REN105L03 | 235 | 7 | 3.579 | 0.757 | 0.721 | -0.051 |
18 | REN162C04 | 235 | 6 | 3.339 | 0.668 | 0.701 | 0.046 |
19 | REN169D01 | 235 | 8 | 5.998 | 0.855 | 0.833 | -0.026 |
20 | REN169O18 | 235 | 7 | 2.864 | 0.677 | 0.651 | -0.040 |
21 | REN247M23 | 235 | 5 | 2.595 | 0.574 | 0.615 | 0.065 |
22 | REN54P11 | 235 | 7 | 4.828 | 0.745 | 0.793 | 0.061 |
23 | REN64E19 | 235 | 7 | 3.711 | 0.728 | 0.731 | 0.004 |
24 | VGL0760 | 235 | 16 | 5.139 | 0.791 | 0.805 | 0.017 |
25 | VGL0910 | 235 | 14 | 5.337 | 0.796 | 0.813 | 0.021 |
26 | VGL1063 | 235 | 11 | 5.822 | 0.783 | 0.828 | 0.055 |
27 | VGL1165 | 235 | 17 | 6.274 | 0.809 | 0.841 | 0.038 |
28 | VGL1828 | 235 | 8 | 3.003 | 0.672 | 0.667 | -0.008 |
29 | VGL2009 | 235 | 8 | 3.042 | 0.643 | 0.671 | 0.043 |
30 | VGL2409 | 235 | 10 | 3.013 | 0.626 | 0.668 | 0.064 |
31 | VGL2918 | 235 | 16 | 7.215 | 0.817 | 0.861 | 0.052 |
32 | VGL3008 | 235 | 10 | 4.373 | 0.745 | 0.771 | 0.035 |
33 | VGL3235 | 235 | 9 | 4.472 | 0.753 | 0.776 | 0.030 |
Standard genetic assessment for 7 STRs in the DLA region
Toy Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 235 | 12 | 5.306 | 0.791 | 0.812 | 0.025 |
2 | DLA I-4ACA | 235 | 8 | 3.595 | 0.711 | 0.722 | 0.016 |
3 | DLA I-4BCT | 235 | 6 | 3.553 | 0.732 | 0.719 | -0.019 |
4 | DLA1131 | 235 | 9 | 3.721 | 0.706 | 0.731 | 0.034 |
5 | 5ACA | 235 | 5 | 2.812 | 0.621 | 0.644 | 0.036 |
6 | 5ACT | 235 | 6 | 2.696 | 0.634 | 0.629 | -0.008 |
7 | 5BCA | 235 | 5 | 3.388 | 0.685 | 0.705 | 0.028 |