Updated May 6, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Black Russian Terrier (n=153) |
---|---|---|
1006 | 387 375 293 180 | 0.049 |
1014 | 375 373 287 178 | 0.036 |
1016 | 382 371 277 178 | 0.010 |
1091 | 381 371 277 181 | 0.503 |
1092 | 376 379 277 181 | 0.252 |
1093 | 386 379 277 180 | 0.082 |
1094 | 395 375 277 176 | 0.013 |
1095 | 382 371 277 184 | 0.023 |
1096 | 395 375 277 182 | 0.003 |
1160 | 386 369 289 176 | 0.029 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Black Russian Terrier (n=153) |
---|---|---|
2005 | 339 322 280 | 0.013 |
2007 | 351 327 280 | 0.049 |
2023 | 341 323 282 | 0.003 |
2031 | 339 322 282 | 0.033 |
2032 | 339 323 280 | 0.082 |
2033 | 339 323 282 | 0.507 |
2037 | 341 327 280 | 0.284 |
2060 | 343 323 284 | 0.029 |
Allele Frequencies
# | Locus Name | Allele | Black Russian Terrier (n=153) |
---|---|---|---|
1 | AHT121 | 92 | 0.094 |
98 | 0.271 | ||
102 | 0.174 | ||
108 | 0.048 | ||
110 | 0.048 | ||
112 | 0.313 | ||
114 | 0.026 | ||
116 | 0.003 | ||
120 | 0.023 | ||
2 | AHT137 | 131 | 0.023 |
133 | 0.223 | ||
135 | 0.139 | ||
137 | 0.100 | ||
141 | 0.290 | ||
147 | 0.203 | ||
151 | 0.023 | ||
3 | AHTH130 | 119 | 0.445 |
121 | 0.039 | ||
125 | 0.035 | ||
127 | 0.006 | ||
129 | 0.045 | ||
131 | 0.429 | ||
4 | AHTh171-A | 217 | 0.006 |
219 | 0.152 | ||
221 | 0.165 | ||
223 | 0.003 | ||
225 | 0.077 | ||
227 | 0.090 | ||
229 | 0.184 | ||
233 | 0.319 | ||
235 | 0.003 | ||
5 | AHTh260 | 238 | 0.026 |
242 | 0.200 | ||
244 | 0.306 | ||
246 | 0.200 | ||
248 | 0.042 | ||
250 | 0.003 | ||
252 | 0.197 | ||
254 | 0.026 | ||
6 | AHTk211 | 87 | 0.716 |
89 | 0.139 | ||
91 | 0.042 | ||
93 | 0.100 | ||
95 | 0.003 | ||
7 | AHTk253 | 286 | 0.239 |
290 | 0.687 | ||
294 | 0.074 | ||
8 | C22.279 | 118 | 0.339 |
120 | 0.139 | ||
122 | 0.026 | ||
124 | 0.155 | ||
126 | 0.113 | ||
130 | 0.226 | ||
134 | 0.003 | ||
9 | FH2001 | 132 | 0.087 |
136 | 0.019 | ||
144 | 0.313 | ||
148 | 0.477 | ||
152 | 0.032 | ||
158 | 0.071 | ||
10 | FH2054 | 152 | 0.116 |
156 | 0.729 | ||
160 | 0.045 | ||
164 | 0.019 | ||
168 | 0.087 | ||
176 | 0.003 | ||
11 | FH2848 | 230 | 0.003 |
232 | 0.140 | ||
234 | 0.331 | ||
236 | 0.003 | ||
238 | 0.273 | ||
240 | 0.234 | ||
242 | 0.016 | ||
12 | INRA21 | 95 | 0.726 |
97 | 0.239 | ||
99 | 0.013 | ||
101 | 0.016 | ||
105 | 0.006 | ||
13 | INU005 | 110 | 0.010 |
122 | 0.319 | ||
124 | 0.571 | ||
126 | 0.097 | ||
128 | 0.003 | ||
14 | INU030 | 144 | 0.329 |
146 | 0.026 | ||
148 | 0.052 | ||
150 | 0.445 | ||
152 | 0.148 | ||
15 | INU055 | 208 | 0.265 |
210 | 0.077 | ||
214 | 0.319 | ||
216 | 0.219 | ||
218 | 0.119 | ||
16 | LEI004 | 85 | 0.497 |
95 | 0.348 | ||
97 | 0.155 | ||
17 | REN105L03 | 231 | 0.410 |
233 | 0.377 | ||
239 | 0.003 | ||
241 | 0.087 | ||
245 | 0.123 | ||
18 | REN162C04 | 200 | 0.226 |
202 | 0.294 | ||
204 | 0.394 | ||
206 | 0.016 | ||
208 | 0.065 | ||
210 | 0.006 | ||
19 | REN169D01 | 210 | 0.303 |
212 | 0.387 | ||
214 | 0.061 | ||
216 | 0.194 | ||
220 | 0.055 | ||
20 | REN169O18 | 162 | 0.248 |
164 | 0.216 | ||
166 | 0.165 | ||
168 | 0.158 | ||
170 | 0.213 | ||
21 | REN247M23 | 268 | 0.036 |
270 | 0.253 | ||
272 | 0.571 | ||
276 | 0.140 | ||
22 | REN54P11 | 222 | 0.381 |
226 | 0.210 | ||
228 | 0.003 | ||
232 | 0.006 | ||
236 | 0.074 | ||
238 | 0.326 | ||
23 | REN64E19 | 139 | 0.084 |
145 | 0.332 | ||
147 | 0.197 | ||
149 | 0.387 | ||
24 | VGL0760 | 12 | 0.016 |
13 | 0.010 | ||
18.2 | 0.003 | ||
19.2 | 0.304 | ||
20.2 | 0.088 | ||
21.2 | 0.186 | ||
22.2 | 0.386 | ||
23.2 | 0.007 | ||
25 | VGL0910 | 12 | 0.231 |
15 | 0.013 | ||
16 | 0.159 | ||
16.1 | 0.029 | ||
17 | 0.003 | ||
17.1 | 0.302 | ||
18.1 | 0.016 | ||
19.1 | 0.247 | ||
26 | VGL1063 | 8 | 0.148 |
10 | 0.252 | ||
13 | 0.032 | ||
14 | 0.010 | ||
15 | 0.116 | ||
16 | 0.042 | ||
17 | 0.245 | ||
18 | 0.026 | ||
20 | 0.126 | ||
21 | 0.003 | ||
27 | VGL1165 | 14 | 0.003 |
15 | 0.003 | ||
16 | 0.503 | ||
17 | 0.026 | ||
18 | 0.084 | ||
19 | 0.003 | ||
23 | 0.003 | ||
27 | 0.045 | ||
28 | 0.116 | ||
29 | 0.165 | ||
30 | 0.042 | ||
31 | 0.006 | ||
28 | VGL1828 | 14 | 0.016 |
15 | 0.221 | ||
16 | 0.016 | ||
17 | 0.273 | ||
18 | 0.042 | ||
19 | 0.136 | ||
20 | 0.292 | ||
21 | 0.003 | ||
29 | VGL2009 | 9 | 0.029 |
11 | 0.074 | ||
13 | 0.290 | ||
14 | 0.484 | ||
15 | 0.123 | ||
30 | VGL2409 | 13 | 0.003 |
15 | 0.497 | ||
16 | 0.197 | ||
17 | 0.174 | ||
18 | 0.029 | ||
19 | 0.100 | ||
31 | VGL2918 | 12 | 0.003 |
13 | 0.107 | ||
14 | 0.351 | ||
15 | 0.013 | ||
17.3 | 0.412 | ||
18.3 | 0.045 | ||
19.3 | 0.036 | ||
20.3 | 0.016 | ||
21.3 | 0.003 | ||
22.3 | 0.013 | ||
32 | VGL3008 | 14 | 0.119 |
15 | 0.087 | ||
17 | 0.010 | ||
18 | 0.139 | ||
19 | 0.458 | ||
20 | 0.013 | ||
21 | 0.010 | ||
22 | 0.155 | ||
23 | 0.010 | ||
33 | VGL3235 | 13 | 0.273 |
14 | 0.123 | ||
15 | 0.149 | ||
16 | 0.182 | ||
17 | 0.084 | ||
18 | 0.185 | ||
19 | 0.003 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 153 | 6.485 | 3.495 | 0.688 | 0.683 | -0.010 | |
SE | 0.361 | 0.184 | 0.019 | 0.019 | 0.009 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 153 | 4.571 | 2.079 | 0.510 | 0.487 | -0.043 | |
SE | 0.529 | 0.192 | 0.056 | 0.051 | 0.015 |
Standard genetic assessment for individual STR loci
Black Russian Terrier
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 153 | 9 | 4.623 | 0.794 | 0.784 | -0.013 |
2 | AHT137 | 153 | 7 | 4.869 | 0.794 | 0.795 | 0.001 |
3 | AHTH130 | 153 | 6 | 2.583 | 0.652 | 0.613 | -0.063 |
4 | AHTh171-A | 153 | 9 | 4.998 | 0.742 | 0.800 | 0.073 |
5 | AHTh260 | 153 | 8 | 4.635 | 0.839 | 0.784 | -0.069 |
6 | AHTk211 | 153 | 5 | 1.839 | 0.452 | 0.456 | 0.010 |
7 | AHTk253 | 153 | 3 | 1.871 | 0.510 | 0.465 | -0.095 |
8 | C22.279 | 153 | 7 | 4.497 | 0.748 | 0.778 | 0.038 |
9 | FH2001 | 153 | 6 | 2.942 | 0.697 | 0.660 | -0.056 |
10 | FH2054 | 153 | 6 | 1.802 | 0.477 | 0.445 | -0.073 |
11 | FH2848 | 153 | 7 | 3.869 | 0.721 | 0.742 | 0.028 |
12 | INRA21 | 153 | 5 | 1.712 | 0.439 | 0.416 | -0.055 |
13 | INU005 | 153 | 5 | 2.286 | 0.606 | 0.563 | -0.078 |
14 | INU030 | 153 | 5 | 3.014 | 0.587 | 0.668 | 0.121 |
15 | INU055 | 153 | 5 | 4.161 | 0.800 | 0.760 | -0.053 |
16 | LEI004 | 153 | 3 | 2.550 | 0.600 | 0.608 | 0.013 |
17 | REN105L03 | 153 | 5 | 3.004 | 0.626 | 0.667 | 0.062 |
18 | REN162C04 | 153 | 6 | 3.373 | 0.729 | 0.703 | -0.036 |
19 | REN169D01 | 153 | 5 | 3.496 | 0.690 | 0.714 | 0.033 |
20 | REN169O18 | 153 | 5 | 4.859 | 0.787 | 0.794 | 0.009 |
21 | REN247M23 | 153 | 4 | 2.431 | 0.610 | 0.589 | -0.037 |
22 | REN54P11 | 153 | 6 | 3.327 | 0.735 | 0.699 | -0.052 |
23 | REN64E19 | 153 | 4 | 3.268 | 0.697 | 0.694 | -0.004 |
24 | VGL0760 | 153 | 8 | 3.521 | 0.686 | 0.716 | 0.042 |
25 | VGL0910 | 153 | 8 | 4.314 | 0.773 | 0.768 | -0.006 |
26 | VGL1063 | 153 | 10 | 5.608 | 0.826 | 0.822 | -0.005 |
27 | VGL1165 | 153 | 12 | 3.275 | 0.755 | 0.695 | -0.087 |
28 | VGL1828 | 153 | 8 | 4.359 | 0.786 | 0.771 | -0.020 |
29 | VGL2009 | 153 | 5 | 2.943 | 0.677 | 0.660 | -0.026 |
30 | VGL2409 | 153 | 6 | 3.061 | 0.671 | 0.673 | 0.003 |
31 | VGL2918 | 153 | 10 | 3.242 | 0.688 | 0.692 | 0.005 |
32 | VGL3008 | 153 | 9 | 3.632 | 0.652 | 0.725 | 0.101 |
33 | VGL3235 | 153 | 7 | 5.366 | 0.857 | 0.814 | -0.053 |
Standard genetic assessment for 7 STRs in the DLA region
Black Russian Terrier
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 153 | 7 | 2.989 | 0.721 | 0.665 | -0.083 |
2 | DLA I-4ACA | 153 | 5 | 2.470 | 0.614 | 0.595 | -0.032 |
3 | DLA I-4BCT | 153 | 4 | 1.266 | 0.208 | 0.210 | 0.010 |
4 | DLA1131 | 153 | 6 | 1.685 | 0.448 | 0.406 | -0.102 |
5 | 5ACA | 153 | 4 | 2.050 | 0.510 | 0.512 | 0.004 |
6 | 5ACT | 153 | 3 | 2.005 | 0.536 | 0.501 | -0.069 |
7 | 5BCA | 153 | 3 | 2.090 | 0.536 | 0.522 | -0.028 |