Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated May 3, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=901)
1002	380 365 281 181	0.0006
1003	387 375 277 186	0.1421
1006	387 375 293 180	0.0155
1008	386 373 289 182	0.0017
1011	376 365 281 180	0.0006
1012	388 369 289 188	0.0011
1014	375 373 287 178	0.0450
1016	382 371 277 178	0.0044
1030	380 373 293 178	0.0011
1040	380 371 277 186	0.0006
1050	380 371 289 182	0.0006
1059	390 371 291 182	0.0006
1062	382 371 277 183	0.0860
1065	380 371 277 181	0.2697
1066	376 375 277 178	0.2797
1067	376 373 277 178	0.0450
1068	380 373 287 181	0.0488
1069	380 365 281 184	0.0388
1070	380 375 291 178	0.0133
1071	380 373 277 178	0.0006
1121	380 371 277 183	0.0006
1128	384 376 287 182	0.0006
1129	382 371 277 181	0.0006
1134	384 365 291 178	0.0006
1137	383 371 281 184	0.0011
1144	390 369 289 182	0.0006
1145	392 373 281 186	0.0006

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=901)
2001	343 324 284	0.1426
2003	343 324 282	0.0205
2005	339 322 280	0.0139
2007	351 327 280	0.0155
2012	345 322 280	0.0006
2017	343 322 280	0.0383
2021	339 324 268	0.0860
2022	339 327 282	0.0006
2023	341 323 282	0.0011
2029	337 324 268	0.0006
2037	341 327 280	0.0139
2045	339 325 284	0.0394
2046	339 329 280	0.2547
2047	339 331 280	0.0094
2048	339 331 282	0.2697
2049	339 331 284	0.0011
2050	341 327 284	0.0311
2051	343 331 282	0.0117
2052	345 321 280	0.0022
2053	343 324 280	0.0294
2059	343 324 276	0.0006
2079	343 323 278	0.0006
2085	345 325 280	0.0011
2086	339 329 284	0.0144
2088	339 329 268	0.0011

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=902)
1	AHT121	90	0.0006
		96	0.2955
		98	0.0471
		100	0.0033
		102	0.4496
		104	0.0139
		106	0.1619
		108	0.0155
		110	0.0122
		112	0.0006
2	AHT137	131	0.1532
		133	0.1332
		135	0.0006
		137	0.1532
		141	0.0006
		143	0.1004
		145	0.0244
		147	0.1010
		149	0.1809
		151	0.1099
		153	0.0416
		155	0.0011
3	AHTH130	111	0.0006
		117	0.0394
		119	0.0011
		121	0.3563
		123	0.0017
		125	0.3019
		127	0.0022
		129	0.2952
		131	0.0017
4	AHTh171-A	219	0.6071
		221	0.0006
		223	0.0272
		225	0.1848
		227	0.1476
		229	0.0006
		233	0.0017
		235	0.0011
		237	0.0294
5	AHTh260	236	0.0006
		238	0.0039
		240	0.0189
		242	0.1243
		244	0.5444
		246	0.2164
		248	0.0710
		250	0.0028
		252	0.0022
		254	0.0155
6	AHTk211	87	0.0017
		89	0.0782
		91	0.1110
		93	0.6632
		95	0.0333
		97	0.1127
7	AHTk253	284	0.0033
		286	0.3574
		288	0.2686
		290	0.0122
		292	0.3585
8	C22.279	110	0.0006
		116	0.2267
		118	0.5094
		120	0.0698
		124	0.0410
		126	0.1524
9	FH2001	124	0.0904
		132	0.2001
		136	0.0299
		140	0.0443
		144	0.3575
		148	0.1674
		152	0.0931
		156	0.0161
		158	0.0006
		160	0.0006
10	FH2054	148	0.1654
		152	0.0144
		156	0.3541
		160	0.0499
		164	0.0233
		168	0.2403
		172	0.1326
		176	0.0194
		180	0.0006
11	FH2848	232	0.0760
		234	0.0400
		236	0.0277
		238	0.4578
		240	0.3968
		242	0.0011
		244	0.0006
12	INRA21	91	0.2214
		95	0.0899
		97	0.0089
		99	0.0777
		101	0.2908
		103	0.3097
		105	0.0017
13	INU005	110	0.1236
		122	0.0006
		124	0.2300
		126	0.5177
		128	0.1236
		132	0.0044
14	INU030	144	0.4051
		150	0.5061
		152	0.0888
15	INU055	210	0.1519
		212	0.0006
		214	0.4424
		216	0.2833
		218	0.1220
16	LEI004	85	0.0815
		93	0.0006
		95	0.3154
		97	0.0948
		105	0.0017
		107	0.5028
		109	0.0022
		111	0.0011
17	REN105L03	227	0.0017
		231	0.0794
		233	0.5538
		235	0.2225
		237	0.0078
		239	0.0488
		241	0.0855
		243	0.0006
18	REN162C04	202	0.0871
		204	0.3907
		206	0.2974
		208	0.2242
		212	0.0006
19	REN169D01	202	0.3568
		210	0.0011
		212	0.1387
		216	0.3835
		218	0.0888
		220	0.0311
20	REN169O18	160	0.0006
		162	0.3085
		164	0.3996
		166	0.0011
		168	0.0910
		170	0.1887
		172	0.0100
		174	0.0006
21	REN247M23	264	0.0011
		268	0.3762
		270	0.0017
		272	0.3990
		276	0.0011
		278	0.2209
22	REN54P11	222	0.0494
		226	0.0477
		228	0.0189
		230	0.0006
		232	0.2997
		234	0.4534
		236	0.1065
		238	0.0239
23	REN64E19	139	0.0294
		143	0.0067
		145	0.2816
		147	0.3548
		149	0.1874
		153	0.1397
		155	0.0006
24	VGL0760	12	0.0017
		13	0.0022
		14	0.0011
		18.2	0.0078
		19.2	0.1641
		20.2	0.1657
		21.2	0.3365
		22.2	0.0887
		23.2	0.2062
		24.2	0.0222
		25.2	0.0039
25	VGL0910	14	0.0116
		15	0.0172
		15.1	0.0200
		16	0.0044
		16.1	0.0028
		17.1	0.0455
		18.1	0.4429
		19	0.0044
		19.1	0.3076
		20	0.0044
		20.1	0.0360
		21	0.0006
		21.1	0.0782
		22.1	0.0238
		23.1	0.0006
26	VGL1063	8	0.0061
		9	0.0011
		12	0.0299
		13	0.6153
		14	0.0416
		15	0.0028
		17	0.0011
		18	0.2323
		19	0.0626
		20	0.0072
27	VGL1165	14	0.0011
		15	0.0006
		16	0.0920
		17	0.2184
		18	0.0089
		19	0.1358
		20	0.0011
		21	0.0355
		26	0.0022
		27	0.1109
		28	0.3226
		29	0.0139
		30	0.0527
		31	0.0044
28	VGL1828	14	0.1208
		15	0.0992
		16	0.0316
		17	0.0006
		18	0.0011
		19	0.4052
		20	0.1164
		21	0.0116
		22	0.2101
		23	0.0033
29	VGL2009	9	0.0006
		10	0.0033
		11	0.0072
		12	0.1480
		13	0.2212
		14	0.1813
		15	0.3808
		16	0.0571
		17	0.0006
30	VGL2409	13	0.0017
		14	0.1687
		15	0.0905
		16	0.3541
		17	0.3396
		18	0.0239
		19	0.0189
		20	0.0028
31	VGL2918	11	0.0006
		12	0.2888
		13	0.1109
		14	0.0072
		15	0.0006
		17.3	0.0188
		18.3	0.0083
		19.3	0.5116
		20.3	0.0504
		21.3	0.0017
		22.3	0.0011
32	VGL3008	13	0.0022
		14	0.4134
		15	0.0028
		16	0.0006
		17	0.0033
		18	0.0361
		19	0.2469
		20	0.0538
		21	0.0721
		22	0.0533
		23	0.0705
		24	0.0416
		25	0.0033
33	VGL3235	11	0.0006
		12	0.4262
		13	0.0061
		14	0.0599
		15	0.4156
		16	0.0377
		17	0.0277
		18	0.0261

Standard genetic assessment based on 33 autosomal STR loci

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	902	8.455	3.423	0.653	0.687	0.051
	SE		0.466	0.179	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	902	7.286	2.949	0.604	0.614	0.016
	SE		0.661	0.341	0.057	0.059	0.005

Standard genetic assessment for individual STR loci

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	902	10	3.141	0.629	0.682	0.078
2	AHT137	902	12	7.571	0.838	0.868	0.035
3	AHTH130	902	9	3.260	0.646	0.693	0.068
4	AHTh171-A	902	9	2.347	0.534	0.574	0.070
5	AHTh260	902	10	2.745	0.544	0.636	0.144
6	AHTk211	902	6	2.119	0.526	0.528	0.004
7	AHTk253	902	5	3.044	0.647	0.671	0.036
8	C22.279	902	6	2.935	0.599	0.659	0.092
9	FH2001	902	10	4.633	0.744	0.784	0.051
10	FH2054	902	9	4.317	0.752	0.768	0.021
11	FH2848	902	7	2.665	0.562	0.625	0.101
12	INRA21	902	7	4.104	0.758	0.756	-0.002
13	INU005	902	6	2.845	0.626	0.648	0.034
14	INU030	902	3	2.336	0.555	0.572	0.030
15	INU055	902	5	3.186	0.660	0.686	0.039
16	LEI004	902	8	2.718	0.603	0.632	0.046
17	REN105L03	902	8	2.686	0.576	0.628	0.082
18	REN162C04	902	5	3.345	0.634	0.701	0.096
19	REN169D01	902	6	3.306	0.653	0.698	0.064
20	REN169O18	902	8	3.346	0.709	0.701	-0.011
21	REN247M23	902	6	2.861	0.613	0.650	0.058
22	REN54P11	902	8	3.201	0.653	0.688	0.051
23	REN64E19	902	7	3.836	0.684	0.739	0.075
24	VGL0760	902	11	4.575	0.759	0.781	0.028
25	VGL0910	902	15	3.314	0.661	0.698	0.054
26	VGL1063	902	10	2.277	0.543	0.561	0.031
27	VGL1165	902	14	5.120	0.766	0.805	0.048
28	VGL1828	902	10	4.041	0.725	0.753	0.036
29	VGL2009	902	9	3.968	0.720	0.748	0.038
30	VGL2409	902	8	3.594	0.698	0.722	0.033
31	VGL2918	902	11	2.774	0.630	0.640	0.015
32	VGL3008	902	13	3.986	0.707	0.749	0.056
33	VGL3235	902	8	2.771	0.583	0.639	0.088

Standard genetic assessment for 7 STRs in the DLA region

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	902	11	3.555	0.712	0.719	0.010
2	DLA I-4ACA	902	6	2.800	0.643	0.643	-0.000
3	DLA I-4BCT	902	6	1.433	0.302	0.302	0.002
4	DLA1131	902	8	3.525	0.692	0.716	0.034
5	5ACA	902	6	1.858	0.452	0.462	0.022
6	5ACT	902	8	4.088	0.734	0.755	0.029
7	5BCA	902	6	3.381	0.693	0.704	0.017

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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