Updated May 3, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Italian Greyhound (n=1451) |
---|---|---|
1008 | 386 373 289 182 | 0.1178 |
1012 | 388 369 289 188 | 0.0086 |
1016 | 382 371 277 178 | 0.0637 |
1030 | 380 373 293 178 | 0.0307 |
1036 | 389 365 289 180 | 0.0010 |
1040 | 380 371 277 186 | 0.0782 |
1044 | 375 373 291 178 | 0.2536 |
1048 | 380 370 289 184 | 0.0114 |
1049 | 380 370 289 186 | 0.0007 |
1050 | 380 371 289 182 | 0.0007 |
1051 | 380 371 289 184 | 0.0014 |
1052 | 380 372 289 184 | 0.1854 |
1053 | 382 377 277 186 | 0.1137 |
1054 | 382 379 277 184 | 0.0152 |
1055 | 386 373 289 180 | 0.0003 |
1056 | 386 373 289 190 | 0.0045 |
1058 | 387 378 287 186 | 0.0059 |
1059 | 390 371 291 182 | 0.1013 |
1065 | 380 371 277 181 | 0.0003 |
1104 | 386 373 289 186 | 0.0024 |
1228 | 390 373 289 176 | 0.0014 |
1235 | 388 369 289 190 | 0.0007 |
1269 | 375 373 277 186 | 0.0007 |
1272 | 386 373 291 178 | 0.0003 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Italian Greyhound (n=1451) |
---|---|---|
2003 | 343 324 282 | 0.0079 |
2014 | 339 322 284 | 0.0014 |
2015 | 339 327 280 | 0.0100 |
2017 | 343 322 280 | 0.2105 |
2023 | 341 323 282 | 0.0307 |
2029 | 337 324 268 | 0.1013 |
2030 | 339 322 268 | 0.0003 |
2031 | 339 322 282 | 0.0634 |
2032 | 339 323 280 | 0.0331 |
2033 | 339 323 282 | 0.0048 |
2034 | 341 322 280 | 0.2536 |
2035 | 341 323 280 | 0.0861 |
2036 | 341 327 276 | 0.0951 |
2037 | 341 327 280 | 0.0086 |
2038 | 345 324 280 | 0.0069 |
2039 | 345 327 276 | 0.0813 |
2040 | 345 327 280 | 0.0010 |
2041 | 349 321 280 | 0.0010 |
2044 | 343 324 268 | 0.0003 |
2067 | 343 322 284 | 0.0003 |
2081 | 343 322 282 | 0.0007 |
2102 | 341 327 268 | 0.0010 |
2132 | 341 322 282 | 0.0003 |
Allele Frequencies
# | Locus Name | Allele | Italian Greyhound (n=1455) |
---|---|---|---|
1 | AHT121 | 94 | 0.0007 |
96 | 0.1233 | ||
98 | 0.1446 | ||
100 | 0.2342 | ||
102 | 0.2067 | ||
104 | 0.0481 | ||
106 | 0.1449 | ||
108 | 0.0615 | ||
110 | 0.0124 | ||
112 | 0.0223 | ||
114 | 0.0010 | ||
116 | 0.0003 | ||
2 | AHT137 | 131 | 0.0667 |
133 | 0.1300 | ||
135 | 0.0007 | ||
137 | 0.1104 | ||
141 | 0.0395 | ||
143 | 0.3982 | ||
147 | 0.1939 | ||
149 | 0.0007 | ||
151 | 0.0598 | ||
3 | AHTH130 | 119 | 0.3320 |
121 | 0.2029 | ||
123 | 0.0007 | ||
127 | 0.2305 | ||
129 | 0.0894 | ||
131 | 0.0321 | ||
133 | 0.0003 | ||
137 | 0.1118 | ||
141 | 0.0003 | ||
4 | AHTh171-A | 219 | 0.0237 |
225 | 0.0519 | ||
227 | 0.3093 | ||
229 | 0.0003 | ||
233 | 0.0003 | ||
235 | 0.0076 | ||
237 | 0.6017 | ||
241 | 0.0052 | ||
5 | AHTh260 | 238 | 0.0038 |
240 | 0.3421 | ||
242 | 0.0003 | ||
244 | 0.0650 | ||
246 | 0.2189 | ||
248 | 0.0010 | ||
250 | 0.0668 | ||
252 | 0.0145 | ||
254 | 0.2870 | ||
256 | 0.0003 | ||
260 | 0.0003 | ||
6 | AHTk211 | 87 | 0.6083 |
89 | 0.0224 | ||
91 | 0.1599 | ||
95 | 0.2094 | ||
7 | AHTk253 | 286 | 0.1981 |
288 | 0.5495 | ||
290 | 0.0628 | ||
292 | 0.1896 | ||
8 | C22.279 | 116 | 0.0615 |
118 | 0.0089 | ||
124 | 0.9271 | ||
126 | 0.0014 | ||
128 | 0.0010 | ||
9 | FH2001 | 132 | 0.1553 |
136 | 0.0086 | ||
140 | 0.0017 | ||
144 | 0.0871 | ||
148 | 0.7173 | ||
152 | 0.0293 | ||
156 | 0.0007 | ||
10 | FH2054 | 152 | 0.0003 |
156 | 0.0348 | ||
160 | 0.1288 | ||
164 | 0.0792 | ||
168 | 0.2744 | ||
172 | 0.3154 | ||
176 | 0.1501 | ||
180 | 0.0152 | ||
184 | 0.0017 | ||
11 | FH2848 | 228 | 0.0320 |
232 | 0.0172 | ||
234 | 0.0038 | ||
236 | 0.0434 | ||
238 | 0.2030 | ||
240 | 0.6442 | ||
242 | 0.0010 | ||
244 | 0.0554 | ||
12 | INRA21 | 95 | 0.5382 |
97 | 0.1413 | ||
99 | 0.0055 | ||
101 | 0.3150 | ||
13 | INU005 | 106 | 0.0141 |
120 | 0.0079 | ||
122 | 0.0014 | ||
124 | 0.4584 | ||
126 | 0.4106 | ||
128 | 0.0003 | ||
130 | 0.1032 | ||
132 | 0.0041 | ||
14 | INU030 | 144 | 0.1333 |
148 | 0.0048 | ||
150 | 0.8533 | ||
152 | 0.0086 | ||
15 | INU055 | 204 | 0.0732 |
210 | 0.3031 | ||
214 | 0.3897 | ||
218 | 0.2337 | ||
222 | 0.0003 | ||
16 | LEI004 | 95 | 0.6001 |
103 | 0.0014 | ||
107 | 0.3899 | ||
109 | 0.0017 | ||
111 | 0.0028 | ||
113 | 0.0041 | ||
17 | REN105L03 | 227 | 0.0433 |
229 | 0.0007 | ||
231 | 0.2194 | ||
233 | 0.5485 | ||
239 | 0.0003 | ||
241 | 0.1878 | ||
18 | REN162C04 | 202 | 0.2497 |
204 | 0.0337 | ||
206 | 0.7166 | ||
19 | REN169D01 | 202 | 0.1025 |
210 | 0.1513 | ||
212 | 0.0199 | ||
214 | 0.0007 | ||
216 | 0.4154 | ||
218 | 0.0003 | ||
220 | 0.3098 | ||
20 | REN169O18 | 162 | 0.2455 |
164 | 0.0836 | ||
166 | 0.0186 | ||
168 | 0.4271 | ||
170 | 0.2252 | ||
21 | REN247M23 | 266 | 0.0017 |
268 | 0.3105 | ||
270 | 0.2249 | ||
272 | 0.1633 | ||
274 | 0.2682 | ||
276 | 0.0313 | ||
22 | REN54P11 | 222 | 0.1588 |
226 | 0.0134 | ||
228 | 0.0364 | ||
232 | 0.3354 | ||
234 | 0.0223 | ||
236 | 0.0003 | ||
238 | 0.4333 | ||
23 | REN64E19 | 139 | 0.0210 |
143 | 0.4536 | ||
145 | 0.2856 | ||
147 | 0.1969 | ||
149 | 0.0423 | ||
153 | 0.0007 | ||
24 | VGL0760 | 19.2 | 0.0027 |
20.2 | 0.1928 | ||
21.2 | 0.5062 | ||
22.2 | 0.1244 | ||
23.2 | 0.1632 | ||
24.2 | 0.0100 | ||
25.2 | 0.0007 | ||
25 | VGL0910 | 13 | 0.0694 |
14 | 0.0216 | ||
15 | 0.0192 | ||
16.1 | 0.1095 | ||
17.1 | 0.3860 | ||
18.1 | 0.0625 | ||
19.1 | 0.2445 | ||
20.1 | 0.0649 | ||
20.2 | 0.0007 | ||
21.1 | 0.0216 | ||
26 | VGL1063 | 8 | 0.1140 |
11 | 0.0045 | ||
12 | 0.0010 | ||
13 | 0.2503 | ||
14 | 0.3798 | ||
15 | 0.0189 | ||
17 | 0.0052 | ||
18 | 0.0646 | ||
19 | 0.1587 | ||
20 | 0.0031 | ||
27 | VGL1165 | 18 | 0.0216 |
19 | 0.3331 | ||
20 | 0.0374 | ||
21 | 0.0127 | ||
22 | 0.0007 | ||
23 | 0.1356 | ||
24 | 0.0525 | ||
25 | 0.1690 | ||
26 | 0.0024 | ||
27 | 0.0021 | ||
28 | 0.0014 | ||
29 | 0.1751 | ||
30 | 0.0532 | ||
31 | 0.0031 | ||
28 | VGL1828 | 14 | 0.0069 |
15 | 0.0801 | ||
16 | 0.0656 | ||
17 | 0.0997 | ||
18 | 0.3285 | ||
19 | 0.3605 | ||
20 | 0.0234 | ||
21 | 0.0351 | ||
22 | 0.0003 | ||
29 | VGL2009 | 9 | 0.1065 |
10 | 0.2624 | ||
11 | 0.1569 | ||
13 | 0.3939 | ||
14 | 0.0735 | ||
15 | 0.0055 | ||
16 | 0.0014 | ||
30 | VGL2409 | 13 | 0.0446 |
14 | 0.0010 | ||
15 | 0.0288 | ||
16 | 0.0127 | ||
17 | 0.1408 | ||
18 | 0.4839 | ||
19 | 0.2819 | ||
20 | 0.0062 | ||
31 | VGL2918 | 7 | 0.0124 |
12 | 0.0629 | ||
13 | 0.1625 | ||
13.2 | 0.0045 | ||
13.3 | 0.0003 | ||
14 | 0.2052 | ||
15 | 0.0643 | ||
16 | 0.0014 | ||
17.3 | 0.0093 | ||
18.3 | 0.2251 | ||
19.3 | 0.0498 | ||
20.3 | 0.1072 | ||
21.3 | 0.0753 | ||
22.3 | 0.0093 | ||
23.3 | 0.0096 | ||
24.3 | 0.0010 | ||
32 | VGL3008 | 15 | 0.1590 |
16 | 0.1054 | ||
17 | 0.1834 | ||
18 | 0.2768 | ||
19 | 0.2531 | ||
20 | 0.0185 | ||
21 | 0.0038 | ||
33 | VGL3235 | 13 | 0.0007 |
14 | 0.2784 | ||
15 | 0.1323 | ||
16 | 0.0072 | ||
17 | 0.3821 | ||
18 | 0.1821 | ||
19 | 0.0162 | ||
20 | 0.0007 | ||
21 | 0.0003 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1455 | 7.576 | 3.342 | 0.613 | 0.649 | 0.057 | |
SE | 0.498 | 0.222 | 0.026 | 0.027 | 0.006 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1455 | 6.714 | 3.369 | 0.662 | 0.691 | 0.041 | |
SE | 0.661 | 0.247 | 0.020 | 0.024 | 0.006 |
Standard genetic assessment for individual STR loci
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 1455 | 12 | 6.195 | 0.799 | 0.839 | 0.047 |
2 | AHT137 | 1455 | 9 | 4.258 | 0.715 | 0.765 | 0.066 |
3 | AHTH130 | 1455 | 9 | 4.425 | 0.758 | 0.774 | 0.021 |
4 | AHTh171-A | 1455 | 8 | 2.169 | 0.491 | 0.539 | 0.088 |
5 | AHTh260 | 1455 | 11 | 3.904 | 0.680 | 0.744 | 0.086 |
6 | AHTk211 | 1455 | 4 | 2.273 | 0.519 | 0.560 | 0.074 |
7 | AHTk253 | 1455 | 4 | 2.624 | 0.580 | 0.619 | 0.062 |
8 | C22.279 | 1455 | 5 | 1.158 | 0.121 | 0.137 | 0.114 |
9 | FH2001 | 1455 | 7 | 1.828 | 0.433 | 0.453 | 0.045 |
10 | FH2054 | 1455 | 9 | 4.511 | 0.747 | 0.778 | 0.041 |
11 | FH2848 | 1455 | 8 | 2.162 | 0.515 | 0.538 | 0.041 |
12 | INRA21 | 1455 | 4 | 2.446 | 0.565 | 0.591 | 0.044 |
13 | INU005 | 1455 | 8 | 2.567 | 0.598 | 0.610 | 0.020 |
14 | INU030 | 1455 | 4 | 1.341 | 0.242 | 0.254 | 0.048 |
15 | INU055 | 1455 | 5 | 3.293 | 0.634 | 0.696 | 0.090 |
16 | LEI004 | 1455 | 6 | 1.952 | 0.504 | 0.488 | -0.034 |
17 | REN105L03 | 1455 | 6 | 2.590 | 0.590 | 0.614 | 0.039 |
18 | REN162C04 | 1455 | 3 | 1.733 | 0.391 | 0.423 | 0.075 |
19 | REN169D01 | 1455 | 7 | 3.307 | 0.645 | 0.698 | 0.075 |
20 | REN169O18 | 1455 | 5 | 3.325 | 0.631 | 0.699 | 0.097 |
21 | REN247M23 | 1455 | 6 | 4.055 | 0.710 | 0.753 | 0.058 |
22 | REN54P11 | 1455 | 7 | 3.054 | 0.652 | 0.673 | 0.030 |
23 | REN64E19 | 1455 | 6 | 3.046 | 0.665 | 0.672 | 0.011 |
24 | VGL0760 | 1455 | 7 | 2.980 | 0.597 | 0.664 | 0.101 |
25 | VGL0910 | 1455 | 10 | 4.255 | 0.754 | 0.765 | 0.014 |
26 | VGL1063 | 1455 | 10 | 4.005 | 0.727 | 0.750 | 0.031 |
27 | VGL1165 | 1455 | 14 | 5.096 | 0.780 | 0.804 | 0.029 |
28 | VGL1828 | 1455 | 9 | 3.841 | 0.666 | 0.740 | 0.100 |
29 | VGL2009 | 1455 | 7 | 3.768 | 0.677 | 0.735 | 0.078 |
30 | VGL2409 | 1455 | 8 | 2.972 | 0.614 | 0.664 | 0.075 |
31 | VGL2918 | 1455 | 16 | 6.787 | 0.809 | 0.853 | 0.051 |
32 | VGL3008 | 1455 | 7 | 4.738 | 0.749 | 0.789 | 0.051 |
33 | VGL3235 | 1455 | 9 | 3.643 | 0.654 | 0.726 | 0.098 |
Standard genetic assessment for 7 STRs in the DLA region
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 1455 | 8 | 4.476 | 0.726 | 0.777 | 0.065 |
2 | DLA I-4ACA | 1455 | 9 | 3.603 | 0.698 | 0.722 | 0.033 |
3 | DLA I-4BCT | 1455 | 5 | 3.183 | 0.654 | 0.686 | 0.046 |
4 | DLA1131 | 1455 | 9 | 3.910 | 0.701 | 0.744 | 0.059 |
5 | 5ACA | 1455 | 6 | 3.274 | 0.672 | 0.695 | 0.033 |
6 | 5ACT | 1455 | 5 | 2.794 | 0.623 | 0.642 | 0.030 |
7 | 5BCA | 1455 | 5 | 2.342 | 0.561 | 0.573 | 0.022 |