Updated Apr 22, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Doberman Pinscher (n=1308) |
---|---|---|
1012 | 388 369 289 188 | 0.0008 |
1016 | 382 371 277 178 | 0.0214 |
1017 | 386 373 289 178 | 0.0818 |
1030 | 380 373 293 178 | 0.1002 |
1040 | 380 371 277 186 | 0.0092 |
1045 | 376 371 277 186 | 0.0004 |
1052 | 380 372 289 184 | 0.0008 |
1068 | 380 373 287 181 | 0.0004 |
1091 | 381 371 277 181 | 0.0019 |
1094 | 395 375 277 176 | 0.7359 |
1105 | 382 379 277 178 | 0.0004 |
1114 | 380 373 287 183 | 0.0008 |
1116 | 380 365 289 186 | 0.0008 |
1150 | 395 379 277 176 | 0.0275 |
1159 | 395 379 277 181 | 0.0038 |
1160 | 386 369 289 176 | 0.0011 |
1174 | 399 375 277 176 | 0.0050 |
1190 | 386 373 291 178 | 0.0004 |
1214 | 397 375 277 176 | 0.0008 |
1245 | 395 375 289 178 | 0.0008 |
1264 | 391 375 277 176 | 0.0057 |
1286 | 394 367 277 184 | 0.0004 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Doberman Pinscher (n=1308) |
---|---|---|
2003 | 343 324 282 | 0.0004 |
2006 | 339 325 280 | 0.0004 |
2011 | 345 322 284 | 0.0004 |
2022 | 339 327 282 | 0.0008 |
2023 | 341 323 282 | 0.1002 |
2024 | 343 323 280 | 0.0004 |
2033 | 339 323 282 | 0.0015 |
2039 | 345 327 276 | 0.0088 |
2040 | 345 327 280 | 0.0004 |
2047 | 339 331 280 | 0.0008 |
2053 | 343 324 280 | 0.0011 |
2060 | 343 323 284 | 0.0011 |
2072 | 339 325 282 | 0.0008 |
2087 | 347 324 280 | 0.0008 |
2089 | 343 331 276 | 0.7683 |
2090 | 339 322 278 | 0.0841 |
2091 | 343 327 288 | 0.0214 |
2092 | 343 331 278 | 0.0031 |
2094 | 339 322 276 | 0.0015 |
2112 | 341 331 276 | 0.0038 |
Allele Frequencies
# | Locus Name | Allele | Doberman Pinscher (n=1311) |
---|---|---|---|
1 | AHT121 | 92 | 0.0027 |
96 | 0.8101 | ||
98 | 0.1442 | ||
100 | 0.0259 | ||
102 | 0.0133 | ||
104 | 0.0011 | ||
108 | 0.0011 | ||
112 | 0.0015 | ||
2 | AHT137 | 131 | 0.5027 |
133 | 0.0019 | ||
135 | 0.0008 | ||
137 | 0.0828 | ||
143 | 0.0004 | ||
145 | 0.0015 | ||
147 | 0.3406 | ||
149 | 0.0481 | ||
151 | 0.0076 | ||
153 | 0.0137 | ||
3 | AHTH130 | 117 | 0.0004 |
119 | 0.7014 | ||
121 | 0.0195 | ||
123 | 0.2346 | ||
125 | 0.0008 | ||
127 | 0.0015 | ||
129 | 0.0389 | ||
131 | 0.0004 | ||
133 | 0.0027 | ||
4 | AHTh171-A | 219 | 0.6205 |
223 | 0.0008 | ||
225 | 0.0244 | ||
227 | 0.1712 | ||
229 | 0.1137 | ||
233 | 0.0576 | ||
241 | 0.0118 | ||
5 | AHTh260 | 238 | 0.8566 |
240 | 0.0008 | ||
242 | 0.0015 | ||
244 | 0.0297 | ||
246 | 0.0984 | ||
248 | 0.0099 | ||
252 | 0.0023 | ||
254 | 0.0008 | ||
6 | AHTk211 | 87 | 0.0023 |
89 | 0.1060 | ||
91 | 0.8833 | ||
93 | 0.0076 | ||
95 | 0.0004 | ||
97 | 0.0004 | ||
7 | AHTk253 | 284 | 0.0004 |
286 | 0.2860 | ||
288 | 0.0149 | ||
290 | 0.6968 | ||
292 | 0.0019 | ||
8 | C22.279 | 110 | 0.0004 |
114 | 0.2006 | ||
116 | 0.0011 | ||
118 | 0.2353 | ||
120 | 0.1373 | ||
124 | 0.0084 | ||
126 | 0.4077 | ||
128 | 0.0088 | ||
130 | 0.0004 | ||
9 | FH2001 | 132 | 0.0229 |
136 | 0.0004 | ||
140 | 0.0015 | ||
144 | 0.9565 | ||
148 | 0.0183 | ||
152 | 0.0004 | ||
10 | FH2054 | 144 | 0.0111 |
148 | 0.0027 | ||
152 | 0.7044 | ||
156 | 0.0290 | ||
160 | 0.0011 | ||
164 | 0.0015 | ||
168 | 0.2449 | ||
172 | 0.0053 | ||
11 | FH2848 | 234 | 0.0008 |
236 | 0.0004 | ||
238 | 0.0301 | ||
240 | 0.0088 | ||
242 | 0.0076 | ||
244 | 0.9508 | ||
246 | 0.0008 | ||
248 | 0.0008 | ||
12 | INRA21 | 91 | 0.0004 |
95 | 0.0671 | ||
99 | 0.0339 | ||
101 | 0.8574 | ||
105 | 0.0412 | ||
13 | INU005 | 110 | 0.0027 |
122 | 0.4195 | ||
124 | 0.3230 | ||
126 | 0.2395 | ||
132 | 0.0153 | ||
14 | INU030 | 144 | 0.2693 |
146 | 0.0015 | ||
150 | 0.5713 | ||
152 | 0.1579 | ||
15 | INU055 | 208 | 0.0011 |
210 | 0.3310 | ||
212 | 0.0053 | ||
216 | 0.1636 | ||
218 | 0.4863 | ||
220 | 0.0008 | ||
222 | 0.0118 | ||
16 | LEI004 | 85 | 0.6609 |
95 | 0.0027 | ||
97 | 0.1430 | ||
103 | 0.0015 | ||
107 | 0.1915 | ||
111 | 0.0004 | ||
17 | REN105L03 | 227 | 0.0053 |
231 | 0.0019 | ||
233 | 0.0008 | ||
235 | 0.9443 | ||
237 | 0.0256 | ||
239 | 0.0057 | ||
241 | 0.0160 | ||
245 | 0.0004 | ||
18 | REN162C04 | 200 | 0.0309 |
202 | 0.5999 | ||
204 | 0.0023 | ||
206 | 0.0458 | ||
208 | 0.0400 | ||
210 | 0.0004 | ||
212 | 0.2490 | ||
214 | 0.0027 | ||
216 | 0.0290 | ||
19 | REN169D01 | 202 | 0.0603 |
210 | 0.0004 | ||
212 | 0.3303 | ||
214 | 0.1861 | ||
216 | 0.3078 | ||
218 | 0.0069 | ||
220 | 0.1079 | ||
224 | 0.0004 | ||
20 | REN169O18 | 158 | 0.0523 |
160 | 0.0004 | ||
162 | 0.4985 | ||
164 | 0.0023 | ||
166 | 0.0031 | ||
168 | 0.2346 | ||
170 | 0.1918 | ||
172 | 0.0172 | ||
21 | REN247M23 | 268 | 0.1152 |
270 | 0.0008 | ||
272 | 0.8818 | ||
274 | 0.0023 | ||
22 | REN54P11 | 220 | 0.0004 |
222 | 0.0008 | ||
226 | 0.5332 | ||
230 | 0.0034 | ||
232 | 0.0019 | ||
234 | 0.1362 | ||
236 | 0.0034 | ||
238 | 0.3177 | ||
240 | 0.0031 | ||
23 | REN64E19 | 139 | 0.0008 |
143 | 0.0004 | ||
145 | 0.5793 | ||
147 | 0.2574 | ||
149 | 0.0172 | ||
153 | 0.1434 | ||
155 | 0.0015 | ||
24 | VGL0760 | 12 | 0.3051 |
13 | 0.3101 | ||
14 | 0.0015 | ||
18.2 | 0.1743 | ||
19.2 | 0.0050 | ||
20.2 | 0.1815 | ||
21.2 | 0.0141 | ||
22 | 0.0004 | ||
22.2 | 0.0042 | ||
23.2 | 0.0031 | ||
24.2 | 0.0004 | ||
25.2 | 0.0004 | ||
25 | VGL0910 | 15 | 0.0072 |
16 | 0.0324 | ||
16.1 | 0.0114 | ||
17 | 0.0027 | ||
17.1 | 0.0031 | ||
18.1 | 0.0061 | ||
19.1 | 0.7059 | ||
20.1 | 0.1217 | ||
21.1 | 0.1007 | ||
22.1 | 0.0084 | ||
23.1 | 0.0004 | ||
26 | VGL1063 | 11 | 0.0008 |
12 | 0.0031 | ||
13 | 0.0034 | ||
14 | 0.5263 | ||
15 | 0.1442 | ||
16 | 0.2002 | ||
17 | 0.0156 | ||
18 | 0.0721 | ||
19 | 0.0217 | ||
20 | 0.0122 | ||
21 | 0.0004 | ||
27 | VGL1165 | 18 | 0.0027 |
20 | 0.0034 | ||
21 | 0.0004 | ||
22 | 0.0301 | ||
24 | 0.0008 | ||
25 | 0.0004 | ||
26 | 0.0011 | ||
27 | 0.0088 | ||
28 | 0.2982 | ||
29 | 0.5164 | ||
30 | 0.0294 | ||
31 | 0.1060 | ||
32 | 0.0023 | ||
28 | VGL1828 | 15 | 0.0034 |
16 | 0.5351 | ||
17 | 0.3467 | ||
18 | 0.0050 | ||
19 | 0.0050 | ||
20 | 0.0862 | ||
21 | 0.0183 | ||
22 | 0.0004 | ||
29 | VGL2009 | 9 | 0.0236 |
11 | 0.5248 | ||
12 | 0.0027 | ||
13 | 0.0225 | ||
14 | 0.2376 | ||
15 | 0.1857 | ||
16 | 0.0031 | ||
30 | VGL2409 | 13 | 0.0004 |
14 | 0.1876 | ||
15 | 0.0053 | ||
16 | 0.0038 | ||
17 | 0.3257 | ||
18 | 0.0671 | ||
19 | 0.3757 | ||
20 | 0.0343 | ||
31 | VGL2918 | 12 | 0.0210 |
13 | 0.0240 | ||
14 | 0.3722 | ||
15 | 0.4523 | ||
16 | 0.0198 | ||
16.3 | 0.0011 | ||
17 | 0.0031 | ||
17.3 | 0.0092 | ||
18.3 | 0.0046 | ||
19.3 | 0.0263 | ||
20.3 | 0.0606 | ||
21.3 | 0.0057 | ||
32 | VGL3008 | 11 | 0.0004 |
13 | 0.1373 | ||
14 | 0.0256 | ||
15 | 0.6285 | ||
16 | 0.0088 | ||
17 | 0.0038 | ||
18 | 0.1034 | ||
19 | 0.0831 | ||
20 | 0.0076 | ||
21 | 0.0015 | ||
33 | VGL3235 | 12 | 0.0313 |
13 | 0.4001 | ||
14 | 0.3627 | ||
15 | 0.0202 | ||
16 | 0.1281 | ||
17 | 0.0130 | ||
18 | 0.0446 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1311 | 7.970 | 2.317 | 0.472 | 0.504 | 0.062 | |
SE | 0.387 | 0.140 | 0.032 | 0.034 | 0.009 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1311 | 7.000 | 1.584 | 0.352 | 0.368 | 0.043 | |
SE | 0.728 | 0.024 | 0.008 | 0.010 | 0.006 |
Standard genetic assessment for individual STR loci
Doberman Pinscher
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 1311 | 8 | 1.475 | 0.304 | 0.322 | 0.058 |
2 | AHT137 | 1311 | 10 | 2.645 | 0.623 | 0.622 | -0.002 |
3 | AHTH130 | 1311 | 9 | 1.822 | 0.423 | 0.451 | 0.063 |
4 | AHTh171-A | 1311 | 7 | 2.318 | 0.542 | 0.569 | 0.046 |
5 | AHTh260 | 1311 | 8 | 1.343 | 0.244 | 0.256 | 0.045 |
6 | AHTk211 | 1311 | 6 | 1.263 | 0.194 | 0.208 | 0.071 |
7 | AHTk253 | 1311 | 5 | 1.762 | 0.322 | 0.432 | 0.256 |
8 | C22.279 | 1311 | 9 | 3.561 | 0.651 | 0.719 | 0.094 |
9 | FH2001 | 1311 | 6 | 1.092 | 0.082 | 0.084 | 0.022 |
10 | FH2054 | 1311 | 8 | 1.795 | 0.433 | 0.443 | 0.022 |
11 | FH2848 | 1311 | 8 | 1.105 | 0.081 | 0.095 | 0.148 |
12 | INRA21 | 1311 | 5 | 1.347 | 0.254 | 0.258 | 0.014 |
13 | INU005 | 1311 | 5 | 2.959 | 0.643 | 0.662 | 0.029 |
14 | INU030 | 1311 | 4 | 2.359 | 0.548 | 0.576 | 0.048 |
15 | INU055 | 1311 | 7 | 2.681 | 0.567 | 0.627 | 0.096 |
16 | LEI004 | 1311 | 6 | 2.024 | 0.497 | 0.506 | 0.019 |
17 | REN105L03 | 1311 | 8 | 1.120 | 0.105 | 0.107 | 0.019 |
18 | REN162C04 | 1311 | 9 | 2.340 | 0.557 | 0.573 | 0.027 |
19 | REN169D01 | 1311 | 8 | 3.940 | 0.661 | 0.746 | 0.114 |
20 | REN169O18 | 1311 | 8 | 2.913 | 0.606 | 0.657 | 0.077 |
21 | REN247M23 | 1311 | 4 | 1.265 | 0.204 | 0.209 | 0.023 |
22 | REN54P11 | 1311 | 9 | 2.477 | 0.560 | 0.596 | 0.061 |
23 | REN64E19 | 1311 | 7 | 2.365 | 0.537 | 0.577 | 0.070 |
24 | VGL0760 | 1311 | 12 | 3.955 | 0.689 | 0.747 | 0.078 |
25 | VGL0910 | 1311 | 11 | 1.906 | 0.457 | 0.475 | 0.039 |
26 | VGL1063 | 1311 | 11 | 2.907 | 0.617 | 0.656 | 0.059 |
27 | VGL1165 | 1311 | 13 | 2.712 | 0.590 | 0.631 | 0.066 |
28 | VGL1828 | 1311 | 8 | 2.414 | 0.582 | 0.586 | 0.006 |
29 | VGL2009 | 1311 | 7 | 2.722 | 0.604 | 0.633 | 0.045 |
30 | VGL2409 | 1311 | 8 | 3.470 | 0.646 | 0.712 | 0.092 |
31 | VGL2918 | 1311 | 12 | 2.865 | 0.579 | 0.651 | 0.111 |
32 | VGL3008 | 1311 | 10 | 2.313 | 0.553 | 0.568 | 0.026 |
33 | VGL3235 | 1311 | 7 | 3.209 | 0.610 | 0.688 | 0.114 |
Standard genetic assessment for 7 STRs in the DLA region
Doberman Pinscher
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 1311 | 11 | 1.642 | 0.376 | 0.391 | 0.038 |
2 | DLA I-4ACA | 1311 | 8 | 1.680 | 0.377 | 0.405 | 0.069 |
3 | DLA I-4BCT | 1311 | 5 | 1.478 | 0.314 | 0.323 | 0.030 |
4 | DLA1131 | 1311 | 7 | 1.554 | 0.337 | 0.357 | 0.054 |
5 | 5ACA | 1311 | 5 | 1.534 | 0.341 | 0.348 | 0.020 |
6 | 5ACT | 1311 | 7 | 1.612 | 0.365 | 0.380 | 0.040 |
7 | 5BCA | 1311 | 6 | 1.587 | 0.352 | 0.370 | 0.047 |