UC Davis School of Veterinary Medicine Veterinary Genetics Laboratory
Genetic Diversity Testing for English Mastiff

DLA class I and II haplotypes identified to date in English Mastiff

DLA Class I Haplotype Frequencies (Updated Jan 27, 2020)
DLA1 #STR typesEnglish Mastiff (n=20)Mastiff (n=5)
1006387 375 293 180--0.10
1016382 371 277 1780.130.30
1030380 373 293 1780.13--
1056386 373 289 1900.130.20
1066376 375 277 1780.630.30
1221380 365 293 180--0.10
DLA Class II Haplotype Frequencies (Updated Jan 27, 2020)
DLA2 #STR typesEnglish Mastiff (n=20)Mastiff (n=5)
2014339 322 2840.130.30
2017343 322 2800.130.20
2023341 323 2820.13--
2046339 329 2800.630.30
2117353 327 280--0.10
2118347 327 280--0.10

STR Allele Frequencies

Table 1: STR alleles from 33 genomic loci and their frequencies

#Locus NameAlleleAllele Frequency (Jan 27, 2020)
English Mastiff (n=20)Mastiff (n=5)
1AHT121 940.100.30
960.130.10
1000.600.30
1020.150.20
1040.030.10
2AHT137 1310.300.40
1370.150.20
1390.03--
1470.05--
1490.480.40
3AHTH130 1210.380.40
123--0.10
1270.280.40
1290.230.10
1310.13--
4AHTh171-A 2190.150.10
2230.130.10
2250.280.30
2270.03--
2290.08--
2310.130.10
2330.130.10
2350.05--
2370.050.30
5AHTh260 2380.530.50
2420.050.10
2440.08--
2460.130.30
2500.230.10
6AHTk211 870.180.40
890.730.60
910.05--
930.03--
950.03--
7AHTk253 2860.600.40
2880.150.10
2900.030.20
2920.180.20
2960.050.10
8C22.279 1160.230.40
1180.08--
1200.400.50
1260.300.10
9FH2001 1280.03--
1320.380.50
1400.030.10
1440.30--
1560.280.40
10FH2054 1520.630.50
1560.130.40
1600.080.10
1640.15--
1680.03--
11FH2848 2360.08--
2380.380.30
2400.400.50
2420.080.10
2440.080.10
12INRA21 930.05--
950.450.40
970.080.10
1010.330.50
1030.10--
13INU005 1100.030.10
1220.08--
1240.850.80
1260.05--
132--0.10
14INU030 1440.250.50
1480.030.20
1500.730.30
15INU055 2100.230.10
2140.03--
2180.750.90
16LEI004 850.15--
950.100.20
1050.180.10
1070.580.70
17REN105L03 2330.430.30
2350.180.30
2370.400.40
18REN162C04 2020.550.80
2040.180.10
2080.280.10
19REN169D01 2020.180.10
2120.350.20
2160.480.70
20REN169O18 1680.10--
1700.100.10
1720.800.90
21REN247M23 2680.881.00
2700.03--
2720.10--
22REN54P11 2260.05--
2320.050.20
2340.200.10
2360.600.70
2380.10--
23REN64E19 1450.03--
1470.050.20
1490.030.10
1530.900.70
24VGL0760 120.100.10
130.300.20
20.2--0.10
21.20.400.30
22.20.130.30
23.20.08--
25VGL0910 120.180.10
130.03--
16.1--0.10
17.10.130.10
18.10.230.10
19.10.250.40
20.10.180.20
21.10.03--
26VGL1063 130.050.10
140.780.90
150.13--
190.05--
27VGL1165 150.350.50
160.03--
180.080.10
190.230.20
210.03--
230.05--
260.030.10
270.230.10
28VGL1828 150.18--
160.330.20
17--0.10
190.300.70
200.20--
29VGL2009 90.130.30
110.13--
120.03--
130.530.50
140.200.20
30VGL2409 130.08--
170.380.60
180.300.30
190.230.10
220.03--
31VGL2918 120.08--
130.300.20
140.15--
18.30.05--
19.30.400.80
20.30.03--
32VGL3008 140.08--
170.05--
180.300.50
190.400.30
200.100.20
210.08--
33VGL3235 130.200.10
140.250.30
160.05--
170.500.60

Veterinary Genetics Laboratory, Tel 530-752-2211, Email VGL