Statistics and Breed-wide Allele Frequency - Polish Lowland Sheepdog

Updated Mar 27, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesPolish Lowland Sheepdog (n=108)Polski Owczarek Nizinny (n=1)
1016382 371 277 1780.023--
1040380 371 277 1860.6670.5
1067376 373 277 1780.3010.5
1068380 373 287 1810.005--
1156380 373 291 1780.005--

DLA Class II Haplotype Frequencies

DLA2 #STR typesPolish Lowland Sheepdog (n=108)Polski Owczarek Nizinny (n=1)
2014339 322 2840.6900.5
2017343 322 2800.2960.5
2053343 324 2800.005--
2067343 322 2840.005--
2098343 323 2820.005--

Allele Frequencies

#Locus NameAllelePolish Lowland Sheepdog (n=108)Polski Owczarek Nizinny (n=1)
1AHT121 1000.4580.5
1020.449--
1040.019--
1060.0740.5
2AHT137 1310.3010.5
1350.005--
1450.6900.5
1490.005--
3AHTH130 1210.056--
1230.032--
1270.4350.5
1310.4630.5
1330.014--
4AHTh171-A 2190.111--
2250.009--
2330.051--
2370.8061.0
2390.009--
2430.014--
5AHTh260 2400.139--
2440.023--
2460.6901.0
2500.148--
6AHTk211 870.241--
910.7131.0
950.046--
7AHTk253 2840.102--
2880.005--
2900.5191.0
2920.375--
8C22.279 1160.236--
1180.245--
1240.5191.0
9FH2001 1320.9720.5
1440.0280.5
10FH2054 1520.0190.5
1560.204--
1600.051--
1640.019--
1680.6620.5
1720.037--
1760.009--
11FH2848 2320.3330.5
2340.005--
2360.454--
2400.037--
2420.1710.5
12INRA21 950.083--
1010.9171.0
13INU005 1240.6850.5
1260.009--
1280.2820.5
1320.023--
14INU030 1440.574--
1500.2731.0
1520.153--
15INU055 2040.259--
2100.4770.5
2180.2640.5
16LEI004 950.8611.0
970.139--
17REN105L03 2270.046--
2310.5190.5
2330.4310.5
2410.005--
18REN162C04 2040.185--
2060.7081.0
2100.106--
19REN169D01 2100.051--
2120.218--
2160.662--
2200.0691.0
20REN169O18 1640.4070.5
1660.009--
1680.005--
1700.5790.5
21REN247M23 2640.005--
2660.0511.0
2680.847--
2720.097--
22REN54P11 2280.3291.0
2320.269--
2360.171--
2380.222--
2400.009--
23REN64E19 1470.190--
1490.111--
1530.6991.0
24VGL0760 140.037--
150.634--
160.009--
20.20.190--
21.20.1301.0
25VGL0910 130.042--
140.2870.5
150.093--
160.1440.5
19.10.093--
20.10.167--
21.10.167--
22.10.009--
26VGL1063 140.0830.5
150.213--
160.338--
170.125--
180.218--
190.0230.5
27VGL1165 170.2920.5
180.005--
250.005--
260.407--
270.037--
280.051--
290.005--
300.1810.5
310.019--
28VGL1828 190.2500.5
200.310--
210.185--
220.042--
230.2080.5
240.005--
29VGL2009 100.176--
110.1530.5
130.009--
140.5320.5
150.102--
160.028--
30VGL2409 150.051--
160.009--
170.6251.0
180.130--
190.185--
31VGL2918 120.7451.0
130.009--
150.019--
17.30.227--
32VGL3008 150.3560.5
160.065--
170.241--
180.1530.5
190.185--
33VGL3235 130.093--
140.6161.0
160.292--

Standard genetic assessment based on 33 autosomal STR loci

Polish Lowland Sheepdog

  NNaNeHoHeF
Mean1094.3942.4290.5280.524-0.004
 SE 0.2810.1760.0320.0300.013

Polski Owczarek Nizinny

  NNaNeHoHeF
Mean11.4851.4850.4850.242-0.485
 SE 0.0870.0870.0870.0430.087

Standard genetic assessment based on 7 STRs in the DLA region

Polish Lowland Sheepdog

  NNaNeHoHeF
Mean1092.7141.5620.2990.3180.042
 SE 0.1710.1300.0670.0720.012

Polski Owczarek Nizinny

  NNaNeHoHeF
Mean11.7141.7140.7140.357-0.714
 SE 0.1710.1710.1710.0850.171

Standard genetic assessment for individual STR loci

Polish Lowland Sheepdog

#LocusNNaNeHoHeF
1AHT12110942.4110.6060.585-0.035
2AHT13710941.7690.3390.4350.219
3AHTH13010952.4460.6330.591-0.071
4AHTh171-A10961.5000.2660.3330.201
5AHTh26010941.9200.4590.4790.043
6AHTk21110931.7510.4400.429-0.027
7AHTk25310942.3710.5780.5780.001
8C22.27910932.5820.6240.613-0.018
9FH200110921.0660.0640.062-0.033
10FH205410972.0750.5230.518-0.009
11FH284810952.8900.6510.6540.004
12INRA2110921.1790.1650.152-0.090
13INU00510941.8230.4130.4510.085
14INU03010932.3540.5690.5750.011
15INU05510932.7450.7250.636-0.140
16LEI00410921.3110.2390.237-0.005
17REN105L0310942.1890.5050.5430.071
18REN162C0410931.8170.4950.450-0.102
19REN169D0110942.0600.5410.515-0.052
20REN169O1810941.9970.4500.4990.099
21REN247M2310941.3940.2750.2820.026
22REN54P1110953.8420.7800.740-0.054
23REN64E1910931.8520.4860.460-0.057
24VGL076010952.2190.5600.549-0.019
25VGL091010985.6110.8530.822-0.038
26VGL106310964.4090.7710.7730.003
27VGL116510993.4830.7340.713-0.030
28VGL182810964.2010.7800.762-0.023
29VGL200910962.8660.6330.6510.028
30VGL240910952.2330.5960.552-0.080
31VGL291810941.6390.3760.3900.036
32VGL300810954.0480.7250.7530.037
33VGL323510932.1030.5780.525-0.102

Polski Owczarek Nizinny

#LocusNNaNeHoHeF
1AHT121122.0001.0000.500-1.000
2AHT137122.0001.0000.500-1.000
3AHTH130122.0001.0000.500-1.000
4AHTh171-A111.0000.0000.0000.000
5AHTh260111.0000.0000.0000.000
6AHTk211111.0000.0000.0000.000
7AHTk253111.0000.0000.0000.000
8C22.279111.0000.0000.0000.000
9FH2001122.0001.0000.500-1.000
10FH2054122.0001.0000.500-1.000
11FH2848122.0001.0000.500-1.000
12INRA21111.0000.0000.0000.000
13INU005122.0001.0000.500-1.000
14INU030111.0000.0000.0000.000
15INU055122.0001.0000.500-1.000
16LEI004111.0000.0000.0000.000
17REN105L03122.0001.0000.500-1.000
18REN162C04111.0000.0000.0000.000
19REN169D01111.0000.0000.0000.000
20REN169O18122.0001.0000.500-1.000
21REN247M23111.0000.0000.0000.000
22REN54P11111.0000.0000.0000.000
23REN64E19111.0000.0000.0000.000
24VGL0760111.0000.0000.0000.000
25VGL0910122.0001.0000.500-1.000
26VGL1063122.0001.0000.500-1.000
27VGL1165122.0001.0000.500-1.000
28VGL1828122.0001.0000.500-1.000
29VGL2009122.0001.0000.500-1.000
30VGL2409111.0000.0000.0000.000
31VGL2918111.0000.0000.0000.000
32VGL3008122.0001.0000.500-1.000
33VGL3235111.0000.0000.0000.000

Standard genetic assessment for 7 STRs in the DLA region

Polish Lowland Sheepdog

#LocusNNaNeHoHeF
1DLA I-3CCA10931.8290.4220.4530.069
2DLA I-4ACA10921.7520.4040.4290.060
3DLA I-4BCT10931.0190.0180.018-0.007
4DLA113110931.8130.4310.4480.039
55ACA10921.7520.4040.4290.060
65ACT10931.0190.0180.018-0.007
75BCA10931.7500.3940.4290.079

Polski Owczarek Nizinny

#LocusNNaNeHoHeF
1DLA I-3CCA122.0001.0000.500-1.000
2DLA I-4ACA122.0001.0000.500-1.000
3DLA I-4BCT111.0000.0000.0000.000
4DLA1131122.0001.0000.500-1.000
55ACA122.0001.0000.500-1.000
65ACT111.0000.0000.0000.000
75BCA122.0001.0000.500-1.000